| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897197
Identifier: 159897197
GI number: 159897197
Start: 766754
End: 767446
Strand: Reverse
Name: 159897197
Synonym: Haur_0668
Alternate gene names: NA
Gene position: 767446-766754 (Counterclockwise)
Preceding gene: 159897198
Following gene: 159897196
Centisome position: 12.09
GC content: 35.35
Gene sequence:
>693_bases ATGGCTACTACTAATAAAAAACCTAAAGTATTTTCTTGGCAGCCTATGGATCTTCTACCTAATCCTAGTATAAAAATCAA TCCTCCCGAAGCAGCGTCATGGCTCAGAACTCTTGAACCATTTGTTTTTCAAGCTAACCATGATAACAATGCAGTTGCTC GTATTCCTAAATTAGTAAATGAGGAGGTAATATATATCTATTATGACCCTAGCCAGAAACGAACAATTGAAACTGAACCT TATAATTATGAGCATCGGCAACTTCATGAAACTCCATCTATTAGTAAACAAGTTTTAAGATGGCTTAATAAAGATAAAGA TCACTTTGACCATATACATCAGGCTATTGAGAAATCAAGGTTTATGCTTGAGCTGGAAGATAATTGGGATGAAGAGGGTA GCGTTGGATATAAAGAAGATACATGGATTAAGGCAGTCAATTTACTTTTGGATATGGTAAAACAATATTTTGCCATGAAT AATCAAAAGATACCTACTCCTATAATTGGCCTTGGCCCAGATGGTAGTATTGATATATCATGGAAACATTCAAATAAACA TCTTCTAATAAATGTTGACGCAACTGATGATTTAGTAACATACTCTGGTGATAATGCTGCTGACAACTCTCTTAGCGGAT CATTTGACTTAAGTGAGGGTGGTTTATGGTTATTGGTATGGCTGATGAGCTAG
Upstream 100 bases:
>100_bases CAGTTAGATTTATTAATAGAAAAATCAAATAATCTTCAAGAAAAATTGGAATCTGTCAATATACATATTCTTGACTCGAA TCCATCATAGGAGAAACGAT
Downstream 100 bases:
>100_bases CTAATGAGCGTTATGCATCAGAATCTATTCCAGATAAAGACTTTCTGTATATGAGAGTACATAAAAGTTTTATTCAAAAT GGAAATCCAGGATATGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MATTNKKPKVFSWQPMDLLPNPSIKINPPEAASWLRTLEPFVFQANHDNNAVARIPKLVNEEVIYIYYDPSQKRTIETEP YNYEHRQLHETPSISKQVLRWLNKDKDHFDHIHQAIEKSRFMLELEDNWDEEGSVGYKEDTWIKAVNLLLDMVKQYFAMN NQKIPTPIIGLGPDGSIDISWKHSNKHLLINVDATDDLVTYSGDNAADNSLSGSFDLSEGGLWLLVWLMS
Sequences:
>Translated_230_residues MATTNKKPKVFSWQPMDLLPNPSIKINPPEAASWLRTLEPFVFQANHDNNAVARIPKLVNEEVIYIYYDPSQKRTIETEP YNYEHRQLHETPSISKQVLRWLNKDKDHFDHIHQAIEKSRFMLELEDNWDEEGSVGYKEDTWIKAVNLLLDMVKQYFAMN NQKIPTPIIGLGPDGSIDISWKHSNKHLLINVDATDDLVTYSGDNAADNSLSGSFDLSEGGLWLLVWLMS >Mature_229_residues ATTNKKPKVFSWQPMDLLPNPSIKINPPEAASWLRTLEPFVFQANHDNNAVARIPKLVNEEVIYIYYDPSQKRTIETEPY NYEHRQLHETPSISKQVLRWLNKDKDHFDHIHQAIEKSRFMLELEDNWDEEGSVGYKEDTWIKAVNLLLDMVKQYFAMNN QKIPTPIIGLGPDGSIDISWKHSNKHLLINVDATDDLVTYSGDNAADNSLSGSFDLSEGGLWLLVWLMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26509; Mature: 26378
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTNKKPKVFSWQPMDLLPNPSIKINPPEAASWLRTLEPFVFQANHDNNAVARIPKLVN CCCCCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHCC EEVIYIYYDPSQKRTIETEPYNYEHRQLHETPSISKQVLRWLNKDKDHFDHIHQAIEKSR CCEEEEEECCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH FMLELEDNWDEEGSVGYKEDTWIKAVNLLLDMVKQYFAMNNQKIPTPIIGLGPDGSIDIS EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEE WKHSNKHLLINVDATDDLVTYSGDNAADNSLSGSFDLSEGGLWLLVWLMS EEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEECCCCEEEEEEECC >Mature Secondary Structure ATTNKKPKVFSWQPMDLLPNPSIKINPPEAASWLRTLEPFVFQANHDNNAVARIPKLVN CCCCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHCC EEVIYIYYDPSQKRTIETEPYNYEHRQLHETPSISKQVLRWLNKDKDHFDHIHQAIEKSR CCEEEEEECCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH FMLELEDNWDEEGSVGYKEDTWIKAVNLLLDMVKQYFAMNNQKIPTPIIGLGPDGSIDIS EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEE WKHSNKHLLINVDATDDLVTYSGDNAADNSLSGSFDLSEGGLWLLVWLMS EEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA