| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897101
Identifier: 159897101
GI number: 159897101
Start: 659653
End: 660426
Strand: Reverse
Name: 159897101
Synonym: Haur_0572
Alternate gene names: NA
Gene position: 660426-659653 (Counterclockwise)
Preceding gene: 159897103
Following gene: 159897100
Centisome position: 10.41
GC content: 51.29
Gene sequence:
>774_bases ATGGAACAAGAACTTATCTTTCGTGCTTTGGCGGACCCATCACGGCGGCAGTTGCTTGATCTGCTGTTTGAACGCGATGG CCGCACGCTCAAGGAGTTAGAAGCGGCACTACCGATGACCCGTTTTGGGGTAATGAAACATTTGCGGGTGCTTGAAGAAG CTAGCCTGATTGTCACCCGTAAAGTTGGCCGCGAACGCTTGCACTATCTCAATCCCGTCCCAATTCAGCTTATTTCCGAC CGTTGGATCAACAAATATGCCGCAGCGCGAGCGATGGCCTTAGTTGATCTCAAAATGGTGCTTGAAGGAGGAAGTAGCAT GACCACAGCAGCAAAGCCGAAGTTGGTCTATCAAACCATTATCCGAGCCTCACAACAACAAGTCTGGGAGGCAATCATCA AGCCAGAGTTCACCACGCGCTACTATTATGGCTGCACAGTTGACACCAATTTAGCGGTTGGTTCAGCCTTCAACTACCAG CGCAGCAATGGAGCAGCGATTGTTGAAGGCCAAGTGGTTGAGGTCGATGCCCCCAATCGCTTAGTCCATACCTACCACTC GCTCTGGCCACCGATGAACGAAGATGCGCCAACCAAAGTAACGTGGGAGCTAGAAGCAATGCCTGGTGGCATTACCAAAG TAACAGTTGTGCACGAAGATTTCCAAGGCGAAACCGCTACCTACCAAGGGCTCAACAGCGGTGGCTGGACATGGATTCTG AGCAACTTGAAAACCTTGCTCGAAACTGGCGAAGCCTTGCCCGAAGAATACTAG
Upstream 100 bases:
>100_bases GCAAATCATTCCCTCCTCGCCAGCACCAATTTCAGCTTTTGCAAACAAATGTTTCAAAAAGCTCTTGACATGTGACCATT TAGTCACATATAATAAACCT
Downstream 100 bases:
>100_bases CGTTTATTGCAAGCTATCACCACGCTTGATAATTCATGTTTCACGCCTCAGCGGCTCACTTTTAGCGAGTCGTTGCTGGC GTTTTAGCAATCGGGAGCTT
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Activator Of; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family; Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; ArsR Family xin-Antitoxin System Antitoxin Component; Transcriptional Regulator Arsr Family; ArsR Family Regulatory Protein; Transcriptional Regulator Protein; Arsr Family Transcriptional Regulator; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Protein ArsR Family; Helix-Turn-Helix Type
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MEQELIFRALADPSRRQLLDLLFERDGRTLKELEAALPMTRFGVMKHLRVLEEASLIVTRKVGRERLHYLNPVPIQLISD RWINKYAAARAMALVDLKMVLEGGSSMTTAAKPKLVYQTIIRASQQQVWEAIIKPEFTTRYYYGCTVDTNLAVGSAFNYQ RSNGAAIVEGQVVEVDAPNRLVHTYHSLWPPMNEDAPTKVTWELEAMPGGITKVTVVHEDFQGETATYQGLNSGGWTWIL SNLKTLLETGEALPEEY
Sequences:
>Translated_257_residues MEQELIFRALADPSRRQLLDLLFERDGRTLKELEAALPMTRFGVMKHLRVLEEASLIVTRKVGRERLHYLNPVPIQLISD RWINKYAAARAMALVDLKMVLEGGSSMTTAAKPKLVYQTIIRASQQQVWEAIIKPEFTTRYYYGCTVDTNLAVGSAFNYQ RSNGAAIVEGQVVEVDAPNRLVHTYHSLWPPMNEDAPTKVTWELEAMPGGITKVTVVHEDFQGETATYQGLNSGGWTWIL SNLKTLLETGEALPEEY >Mature_257_residues MEQELIFRALADPSRRQLLDLLFERDGRTLKELEAALPMTRFGVMKHLRVLEEASLIVTRKVGRERLHYLNPVPIQLISD RWINKYAAARAMALVDLKMVLEGGSSMTTAAKPKLVYQTIIRASQQQVWEAIIKPEFTTRYYYGCTVDTNLAVGSAFNYQ RSNGAAIVEGQVVEVDAPNRLVHTYHSLWPPMNEDAPTKVTWELEAMPGGITKVTVVHEDFQGETATYQGLNSGGWTWIL SNLKTLLETGEALPEEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29026; Mature: 29026
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQELIFRALADPSRRQLLDLLFERDGRTLKELEAALPMTRFGVMKHLRVLEEASLIVTR CCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KVGRERLHYLNPVPIQLISDRWINKYAAARAMALVDLKMVLEGGSSMTTAAKPKLVYQTI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IRASQQQVWEAIIKPEFTTRYYYGCTVDTNLAVGSAFNYQRSNGAAIVEGQVVEVDAPNR HHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEECCCCCCCCCCCCEEEECEEEEECCCCH LVHTYHSLWPPMNEDAPTKVTWELEAMPGGITKVTVVHEDFQGETATYQGLNSGGWTWIL HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEECCCCCCCHHHHH SNLKTLLETGEALPEEY HHHHHHHHHHHCCCCCC >Mature Secondary Structure MEQELIFRALADPSRRQLLDLLFERDGRTLKELEAALPMTRFGVMKHLRVLEEASLIVTR CCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KVGRERLHYLNPVPIQLISDRWINKYAAARAMALVDLKMVLEGGSSMTTAAKPKLVYQTI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IRASQQQVWEAIIKPEFTTRYYYGCTVDTNLAVGSAFNYQRSNGAAIVEGQVVEVDAPNR HHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEECCCCCCCCCCCCEEEECEEEEECCCCH LVHTYHSLWPPMNEDAPTKVTWELEAMPGGITKVTVVHEDFQGETATYQGLNSGGWTWIL HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEECCCCCCCHHHHH SNLKTLLETGEALPEEY HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA