| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897080
Identifier: 159897080
GI number: 159897080
Start: 645706
End: 646107
Strand: Reverse
Name: 159897080
Synonym: Haur_0551
Alternate gene names: NA
Gene position: 646107-645706 (Counterclockwise)
Preceding gene: 159897081
Following gene: 159897079
Centisome position: 10.18
GC content: 45.77
Gene sequence:
>402_bases ATGGCTGTCATGCTTTCCCTGACCATCGGCGGCGAGGTCAAAGAAATTCGTAAGTTGCCGTTTCGTCAAAATCAAGACTT CAAAAAGAAGTTGATTGATGTCGCCAAAAAGGTGATGCCACAAGTTGACCAGATGAGTAAGCCGCCCGCAACCAATGAAG AGGGTAAACAATCCGGCGAAGCCTTGACGGCCTATATCGTCACGATGCTGGAATCGGTTGATGGTCTGCTGGAAGATGCT TTATCACTGATTATTGCCTATGCGAGTGGTGCAATTCCAAAAAGCATCGATGACGAAATTCTTGATGAGGAAATTATTGA TGCCTTTCTGTGCATTGCCAATGCGGCTGTCCCGATAAAAAAGTTACAAGTCTTGGCAGCGGGTTTTTCAAGCATTGGCT AA
Upstream 100 bases:
>100_bases ATTTCAATTAGTCCGCGTGGTTGAAGCCGCGTCCTAAGGGATTGGGAGAGTGAGAGGGTTTGGTTTGATTGACATTTTTA AGCGCAAAGGATACACACCC
Downstream 100 bases:
>100_bases ATGAATCCACCCATACCGATGATGTGGTGGAAGTAATGTATGCCGTCTATGGCATTCCACCCCACGAGCTGTATGAAGAA ACCGTGCTGGAGCTGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAVMLSLTIGGEVKEIRKLPFRQNQDFKKKLIDVAKKVMPQVDQMSKPPATNEEGKQSGEALTAYIVTMLESVDGLLEDA LSLIIAYASGAIPKSIDDEILDEEIIDAFLCIANAAVPIKKLQVLAAGFSSIG
Sequences:
>Translated_133_residues MAVMLSLTIGGEVKEIRKLPFRQNQDFKKKLIDVAKKVMPQVDQMSKPPATNEEGKQSGEALTAYIVTMLESVDGLLEDA LSLIIAYASGAIPKSIDDEILDEEIIDAFLCIANAAVPIKKLQVLAAGFSSIG >Mature_132_residues AVMLSLTIGGEVKEIRKLPFRQNQDFKKKLIDVAKKVMPQVDQMSKPPATNEEGKQSGEALTAYIVTMLESVDGLLEDAL SLIIAYASGAIPKSIDDEILDEEIIDAFLCIANAAVPIKKLQVLAAGFSSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14335; Mature: 14204
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMLSLTIGGEVKEIRKLPFRQNQDFKKKLIDVAKKVMPQVDQMSKPPATNEEGKQSGE CEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH ALTAYIVTMLESVDGLLEDALSLIIAYASGAIPKSIDDEILDEEIIDAFLCIANAAVPIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH KLQVLAAGFSSIG HHHHHHHHHHHCC >Mature Secondary Structure AVMLSLTIGGEVKEIRKLPFRQNQDFKKKLIDVAKKVMPQVDQMSKPPATNEEGKQSGE EEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH ALTAYIVTMLESVDGLLEDALSLIIAYASGAIPKSIDDEILDEEIIDAFLCIANAAVPIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH KLQVLAAGFSSIG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA