| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897055
Identifier: 159897055
GI number: 159897055
Start: 612597
End: 612938
Strand: Reverse
Name: 159897055
Synonym: Haur_0526
Alternate gene names: NA
Gene position: 612938-612597 (Counterclockwise)
Preceding gene: 159897074
Following gene: 159897054
Centisome position: 9.66
GC content: 51.17
Gene sequence:
>342_bases ATGCTTTACACAATTTTGACAGCCATCATAGCAGGTCTTGCCTGTGCCGTGTTGATGGTTGCCATTCATGGATTGCTTTG GCATCGCCATTGGCGCTTATCACGACCGCAGGCCTATACGGTAGGCACCGCCTGTATTGGCATTGTGCTCACCATCTGGG CGCTATTACTCAACCAACCAGCAACGATTATCGGTTTTTGGGCGATTGCTGGCCTGGCTGGCTCGGCTGATTTAGTAGCT TGGTGGATTCGGTCACGCTTACAACGAATCGAAACTGAGGCCGAGGCTGCGGGTTTTATCCGTGGCCAAATTGTTGGGTT GGATAACGATGGGCAAAACTAA
Upstream 100 bases:
>100_bases GAATCAAACCGCAGAATCCACTACACCATCCTACTAGTCATCGTCGGATTTGTGACAACGTATTTCTGTTTCAATCCCTG TTTAAGGATTCGAGGGCAAG
Downstream 100 bases:
>100_bases GCAAGATGAACTGATTGGCCTGGTCGAAGATGCAACCGCCCTCAACAATGAAATTGGTGATGCCCATAAGCATATAGCTC TGCGAGCTAACAGCATGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MLYTILTAIIAGLACAVLMVAIHGLLWHRHWRLSRPQAYTVGTACIGIVLTIWALLLNQPATIIGFWAIAGLAGSADLVA WWIRSRLQRIETEAEAAGFIRGQIVGLDNDGQN
Sequences:
>Translated_113_residues MLYTILTAIIAGLACAVLMVAIHGLLWHRHWRLSRPQAYTVGTACIGIVLTIWALLLNQPATIIGFWAIAGLAGSADLVA WWIRSRLQRIETEAEAAGFIRGQIVGLDNDGQN >Mature_113_residues MLYTILTAIIAGLACAVLMVAIHGLLWHRHWRLSRPQAYTVGTACIGIVLTIWALLLNQPATIIGFWAIAGLAGSADLVA WWIRSRLQRIETEAEAAGFIRGQIVGLDNDGQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12321; Mature: 12321
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYTILTAIIAGLACAVLMVAIHGLLWHRHWRLSRPQAYTVGTACIGIVLTIWALLLNQP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ATIIGFWAIAGLAGSADLVAWWIRSRLQRIETEAEAAGFIRGQIVGLDNDGQN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC >Mature Secondary Structure MLYTILTAIIAGLACAVLMVAIHGLLWHRHWRLSRPQAYTVGTACIGIVLTIWALLLNQP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC ATIIGFWAIAGLAGSADLVAWWIRSRLQRIETEAEAAGFIRGQIVGLDNDGQN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA