Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897041

Identifier: 159897041

GI number: 159897041

Start: 594670

End: 595164

Strand: Reverse

Name: 159897041

Synonym: Haur_0511

Alternate gene names: NA

Gene position: 595164-594670 (Counterclockwise)

Preceding gene: 159897042

Following gene: 159897040

Centisome position: 9.38

GC content: 40.61

Gene sequence:

>495_bases
ATGAATCGTCAACAGAGTGATGTTCCTAAACCCAGCCTTGATCAATTGATCGATGATTGTTTTGGCTATGGCATCCGCTT
AGGCACGATTATTGGCGGTATCTATGGGTTTGGGCTTGGTGTAGGATTTGATATTTTTGTTGGTTTGGTGGCAGCAATCA
TTGGCCTCATTTATGGTTTCTTCATGGGGTTAATTGGCAGCCCAATTGTGGCAATAATCATCTACAATTGGCGTAAATGG
TTTGCGGCAAATTTTATCGGCAATCTCGGCTTATGGCTGATAACGCCAATCATATTAAGTAGTTTACACTGCCTCAGTTG
GTATCCATTTTTCGCGGCTAACTACTCGCTGAGCGAATATATTGGCTTGTTTTTCGGTCGCGAAACCCAGCTGTTTTACT
TCTATATTTTTATTCGCTACCCTAATTGGCTGATGAGTTTATTGATGCTATTATTCTTACCATTATTTTTAGATCAACTC
GACTCGATCGAATAG

Upstream 100 bases:

>100_bases
AAGTCAAACTCCATAAGCTATGGCTTGTAAAAGCACTGTAACATGGCCGCGAGATACTTCCGTTTAAGCGAAACATCGGC
TTTAATCGGGAGTATCTCAG

Downstream 100 bases:

>100_bases
GAGAGGGTATGCTTCAACCCACGCTTTCGGCTTACCCTAAGCCCAATTTAAGGTAAACTTACGCTGATTTTTTTATAATT
GAGCGTTTAAGATGCAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNRQQSDVPKPSLDQLIDDCFGYGIRLGTIIGGIYGFGLGVGFDIFVGLVAAIIGLIYGFFMGLIGSPIVAIIIYNWRKW
FAANFIGNLGLWLITPIILSSLHCLSWYPFFAANYSLSEYIGLFFGRETQLFYFYIFIRYPNWLMSLLMLLFLPLFLDQL
DSIE

Sequences:

>Translated_164_residues
MNRQQSDVPKPSLDQLIDDCFGYGIRLGTIIGGIYGFGLGVGFDIFVGLVAAIIGLIYGFFMGLIGSPIVAIIIYNWRKW
FAANFIGNLGLWLITPIILSSLHCLSWYPFFAANYSLSEYIGLFFGRETQLFYFYIFIRYPNWLMSLLMLLFLPLFLDQL
DSIE
>Mature_164_residues
MNRQQSDVPKPSLDQLIDDCFGYGIRLGTIIGGIYGFGLGVGFDIFVGLVAAIIGLIYGFFMGLIGSPIVAIIIYNWRKW
FAANFIGNLGLWLITPIILSSLHCLSWYPFFAANYSLSEYIGLFFGRETQLFYFYIFIRYPNWLMSLLMLLFLPLFLDQL
DSIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18699; Mature: 18699

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00214 FABP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQQSDVPKPSLDQLIDDCFGYGIRLGTIIGGIYGFGLGVGFDIFVGLVAAIIGLIYGF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGLIGSPIVAIIIYNWRKWFAANFIGNLGLWLITPIILSSLHCLSWYPFFAANYSLSEY
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IGLFFGRETQLFYFYIFIRYPNWLMSLLMLLFLPLFLDQLDSIE
HHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRQQSDVPKPSLDQLIDDCFGYGIRLGTIIGGIYGFGLGVGFDIFVGLVAAIIGLIYGF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGLIGSPIVAIIIYNWRKWFAANFIGNLGLWLITPIILSSLHCLSWYPFFAANYSLSEY
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
IGLFFGRETQLFYFYIFIRYPNWLMSLLMLLFLPLFLDQLDSIE
HHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA