Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159896852

Identifier: 159896852

GI number: 159896852

Start: 380290

End: 380922

Strand: Reverse

Name: 159896852

Synonym: Haur_0319

Alternate gene names: NA

Gene position: 380922-380290 (Counterclockwise)

Preceding gene: 159896853

Following gene: 159896849

Centisome position: 6.0

GC content: 51.34

Gene sequence:

>633_bases
ATGGACACAACAAGCTTTCCTGAATTTTGGCACTCCATCCCGCGTGACATTGCAGCCCTGATGCCAAACTCACCCGAATT
ACCCTACGACGCACATTTGATCTTAAATTCGATCGCTCGCCATTCGCATGAACTATATCAACATTCGCTGCGGGTTGGCC
ACATGGCTTGGCATATGAGCCATAGTTTGGGTGTACCAACCTATGAACGGCAGCAGATTTGGTTGGCAGCACTGTTGCAT
GATTGTGGCAAAACCCGCATGCCACGAAGCTTGCTGTTTTGCCCACCGCCAGGTAGCCCACATTGGGAAGTTGCGCTCTA
TCAACAGCATGTCAACGAAAGCCTTGATGTTTTACATGCTTATCCCACGCTGCATTTGCTCATTCCCTTAGTGGCTGAGC
ATCACGAACGGATTGATGGCACAGGTTTTCCACGTGGCAGCAAATATCCAGCCCGTAGTGCCCAAATCGTGGCTTTGGCC
AATGCGCTCGACCATTTGCGAGCACAACCAAGCAGCCTTAGCCCCAATCTGCAAGGCTTAATCGATCAAGCGATTGATCA
CCATTGGGATTCAGCAGTGGCTGCGACGGCGCTTAGCGCTTGGCAGCAAACGAAGCTGGCTGAGGTTGGATAA

Upstream 100 bases:

>100_bases
ATGACACACCAACTGCAAACCGCGCCACTCAACACCGCTTGGCAATGGGGCAACATCGAATCAAGCAAAGGGATGCTTTA
ATTGAAGAGGAGAACGCGGC

Downstream 100 bases:

>100_bases
GCGTCTCTTGCCATTCGGCAGCTTGTTGGCGCAAGCGACCACGCACCAAAGCCAAGGCATCAGCCGATTGATCTGCTGCA
ATCCAGCATCGCCCTAGGCG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Response Regulator; Metal Dependent Phophohydrolase; HAMP Domain-Containing Cyclic Diguanylate Phosphodiesterase; Sensory Box Protein; Two-Component System Response Regulator; HD Domain Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MDTTSFPEFWHSIPRDIAALMPNSPELPYDAHLILNSIARHSHELYQHSLRVGHMAWHMSHSLGVPTYERQQIWLAALLH
DCGKTRMPRSLLFCPPPGSPHWEVALYQQHVNESLDVLHAYPTLHLLIPLVAEHHERIDGTGFPRGSKYPARSAQIVALA
NALDHLRAQPSSLSPNLQGLIDQAIDHHWDSAVAATALSAWQQTKLAEVG

Sequences:

>Translated_210_residues
MDTTSFPEFWHSIPRDIAALMPNSPELPYDAHLILNSIARHSHELYQHSLRVGHMAWHMSHSLGVPTYERQQIWLAALLH
DCGKTRMPRSLLFCPPPGSPHWEVALYQQHVNESLDVLHAYPTLHLLIPLVAEHHERIDGTGFPRGSKYPARSAQIVALA
NALDHLRAQPSSLSPNLQGLIDQAIDHHWDSAVAATALSAWQQTKLAEVG
>Mature_210_residues
MDTTSFPEFWHSIPRDIAALMPNSPELPYDAHLILNSIARHSHELYQHSLRVGHMAWHMSHSLGVPTYERQQIWLAALLH
DCGKTRMPRSLLFCPPPGSPHWEVALYQQHVNESLDVLHAYPTLHLLIPLVAEHHERIDGTGFPRGSKYPARSAQIVALA
NALDHLRAQPSSLSPNLQGLIDQAIDHHWDSAVAATALSAWQQTKLAEVG

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23528; Mature: 23528

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTSFPEFWHSIPRDIAALMPNSPELPYDAHLILNSIARHSHELYQHSLRVGHMAWHMS
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSLGVPTYERQQIWLAALLHDCGKTRMPRSLLFCPPPGSPHWEVALYQQHVNESLDVLHA
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
YPTLHLLIPLVAEHHERIDGTGFPRGSKYPARSAQIVALANALDHLRAQPSSLSPNLQGL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
IDQAIDHHWDSAVAATALSAWQQTKLAEVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTTSFPEFWHSIPRDIAALMPNSPELPYDAHLILNSIARHSHELYQHSLRVGHMAWHMS
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSLGVPTYERQQIWLAALLHDCGKTRMPRSLLFCPPPGSPHWEVALYQQHVNESLDVLHA
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
YPTLHLLIPLVAEHHERIDGTGFPRGSKYPARSAQIVALANALDHLRAQPSSLSPNLQGL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
IDQAIDHHWDSAVAATALSAWQQTKLAEVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA