| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159896783
Identifier: 159896783
GI number: 159896783
Start: 292961
End: 294865
Strand: Reverse
Name: 159896783
Synonym: Haur_0250
Alternate gene names: NA
Gene position: 294865-292961 (Counterclockwise)
Preceding gene: 159896784
Following gene: 159896782
Centisome position: 4.65
GC content: 53.23
Gene sequence:
>1905_bases ATGGGATTTATTGCACCATTAATGTTTATCGCAGGCGGCACGGTTCTCGCAGGAATTGTGGCCATGTACATCTTGCGCCT CCGCCGCGAGGAACGCACGGTTTCGTCAACCTTTTTATGGAATCAATTGGTTCGCGATGTTGAGGCCAACGCGCCGTGGC AACGCCTCCGCCATAATTGGTTGCTCTGGCTGCAATTGCTCATTGCCCTGCTTTTGGCGTTTGCACTGGCCCGACCGTTC AGTCCAACCGTTGGGGTTAGTGGGCAAAATCTCATTGTAATTATCGATCGCTCGGCTTCGATGGGCGCAACCGATGTTGC CGCCAATCGGCTTGAGGCCGCTAAAGCTGAAGCAATTCGCTTGGTCGATCAGTTGCCCGATGGCGCACGCGCCACAATTA TGGCAATTGGCGGCGAGCTTGATGTGCCGGCTGCTGCCACCACTGATCGCCGTGAAATTCGCGATGCAATCGAAGGCATT GAATTGCGCTTGGGCGGCGGCTCGGATATGTCGCAAGCCTTGAGTTTGGCTGGGGCATTGGCGGCTCGCGAAGAAGAGTC GGAAGTGGCAATTTTGACCGATGGTCAGGTAACCGTGCCAATGAGCGCCACCTTGCCCGCCAAAATTCGCTATTTCCCAG TTGGCACGAGCAACAACAATCAAGCGATCGCGGCAATTGCCTTGAACGAACTAGCGCCAGGCACGTTGACCTTTTTTGCC CGCGTTACCAACGAAGGCCAAGAGCGGGTTACACGGCGTTTGTTGGTAAACCTCGATGGCACCTTGTTCAATGCCTATGA TCTCGAAATTTTGCCGGGCCAAGATCAAACCGTCAATATCGATGTGCCAGCCACCGCCACCACGGTTGAGGCACGACTTG ATGGGAGTGATAGCCTGCCCAGCGACGATGTGGCTTGGGCAATTCGCCCATCAAGCGATGCAATTCCGGTGCGTTTTGTC ACGCCAGGCAATCGTTTTCTGGCTACAGCCTTGGGATTGATGCCACGGGTACAAGTTTCCGCCTATCTGACTGAAACTGC CACCTTTACTGATACAGCCTTGTTGACGGTACTCGATGCCAGTTTACCAGAGCCATTACCCGCTGGTAATTTGCTGTTTA TCGCGCCCTATCGCTCAACCGAATATTTCTCAGTGACTGGAAGTTTGGATCGACCAGTGCCCCGCCCAGCGCCAACCGAT GATCCATTGTTGCGCAATGTTGAGCTTGGCGAAGTCAATATTTTGAAATCGGCACGGATCGAAAATGCCCCTTGGGCGCA TACGGTGATCGATAGTGCGGCTGGCCCGTTGCTAATTGCAGGCGAAGTTGATGGGCGACGAATTGCAGTGCTCGGCTTCG ACACCCATGATTCCGATTTGCCGTTGAATATTTCATTTCCCTTGTTGATTGCCAATTTGGTGGGCTATTTAGCACCTGGC ACTGGTGGCGATTCAGCGATTTTGCCGCCTGATCAAGAATTAGCCTTTGCAGTAACCAATGATATTAGCGGCGTGCGCTT GATTCAGCCCGATGGCGAAACCCACGAAGCCACGCCAAACAATGGCTTGATTAGTTTTGATGGCAGTTTGATGAACCAAG CTGGCATTTACAGCGTCGAATTGCTACGCGATGGCGTGGTCAGTAAAACCCAGCGCTACGTGGTCAATGCCTATCGCGAA AGCGAAGCCAAAATCACCCCAGTTCAGGTGCTCGATGTTGCCCAAATTGGTGGTGGTCAAGTTGGCTCAAGTGAAACCAC CCAAGCCAAAGCAGGCCGTGAAGAGTGGTGGCGTTGGTTAGCTTTGGCCGCATTAATTTTTGTGTTGATCGAATGGGTTT TTGCTCAACGCAGCGCCTTCACACGGCTCAAACTGTGGTGGAATGCGCGGCGCAGCGCGGCATAA
Upstream 100 bases:
>100_bases ACCCAAGCGAGCATTTAAATCGCCAGCCGATCAGCAGATAGCGTTGCAACAATTCGCCCAATATCATGCTGACGCACAGC TAGCAGAGTGAGTAGATTGT
Downstream 100 bases:
>100_bases AGAATTCCCTCACCCCCAACCCCTCTCCCACTGCGGCGGGAGAGGGGAGTTTAGCGCAAGGGTTTCACACGAAAAATGGG GTGAGGGAACCCAATCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MGFIAPLMFIAGGTVLAGIVAMYILRLRREERTVSSTFLWNQLVRDVEANAPWQRLRHNWLLWLQLLIALLLAFALARPF SPTVGVSGQNLIVIIDRSASMGATDVAANRLEAAKAEAIRLVDQLPDGARATIMAIGGELDVPAAATTDRREIRDAIEGI ELRLGGGSDMSQALSLAGALAAREEESEVAILTDGQVTVPMSATLPAKIRYFPVGTSNNNQAIAAIALNELAPGTLTFFA RVTNEGQERVTRRLLVNLDGTLFNAYDLEILPGQDQTVNIDVPATATTVEARLDGSDSLPSDDVAWAIRPSSDAIPVRFV TPGNRFLATALGLMPRVQVSAYLTETATFTDTALLTVLDASLPEPLPAGNLLFIAPYRSTEYFSVTGSLDRPVPRPAPTD DPLLRNVELGEVNILKSARIENAPWAHTVIDSAAGPLLIAGEVDGRRIAVLGFDTHDSDLPLNISFPLLIANLVGYLAPG TGGDSAILPPDQELAFAVTNDISGVRLIQPDGETHEATPNNGLISFDGSLMNQAGIYSVELLRDGVVSKTQRYVVNAYRE SEAKITPVQVLDVAQIGGGQVGSSETTQAKAGREEWWRWLALAALIFVLIEWVFAQRSAFTRLKLWWNARRSAA
Sequences:
>Translated_634_residues MGFIAPLMFIAGGTVLAGIVAMYILRLRREERTVSSTFLWNQLVRDVEANAPWQRLRHNWLLWLQLLIALLLAFALARPF SPTVGVSGQNLIVIIDRSASMGATDVAANRLEAAKAEAIRLVDQLPDGARATIMAIGGELDVPAAATTDRREIRDAIEGI ELRLGGGSDMSQALSLAGALAAREEESEVAILTDGQVTVPMSATLPAKIRYFPVGTSNNNQAIAAIALNELAPGTLTFFA RVTNEGQERVTRRLLVNLDGTLFNAYDLEILPGQDQTVNIDVPATATTVEARLDGSDSLPSDDVAWAIRPSSDAIPVRFV TPGNRFLATALGLMPRVQVSAYLTETATFTDTALLTVLDASLPEPLPAGNLLFIAPYRSTEYFSVTGSLDRPVPRPAPTD DPLLRNVELGEVNILKSARIENAPWAHTVIDSAAGPLLIAGEVDGRRIAVLGFDTHDSDLPLNISFPLLIANLVGYLAPG TGGDSAILPPDQELAFAVTNDISGVRLIQPDGETHEATPNNGLISFDGSLMNQAGIYSVELLRDGVVSKTQRYVVNAYRE SEAKITPVQVLDVAQIGGGQVGSSETTQAKAGREEWWRWLALAALIFVLIEWVFAQRSAFTRLKLWWNARRSAA >Mature_633_residues GFIAPLMFIAGGTVLAGIVAMYILRLRREERTVSSTFLWNQLVRDVEANAPWQRLRHNWLLWLQLLIALLLAFALARPFS PTVGVSGQNLIVIIDRSASMGATDVAANRLEAAKAEAIRLVDQLPDGARATIMAIGGELDVPAAATTDRREIRDAIEGIE LRLGGGSDMSQALSLAGALAAREEESEVAILTDGQVTVPMSATLPAKIRYFPVGTSNNNQAIAAIALNELAPGTLTFFAR VTNEGQERVTRRLLVNLDGTLFNAYDLEILPGQDQTVNIDVPATATTVEARLDGSDSLPSDDVAWAIRPSSDAIPVRFVT PGNRFLATALGLMPRVQVSAYLTETATFTDTALLTVLDASLPEPLPAGNLLFIAPYRSTEYFSVTGSLDRPVPRPAPTDD PLLRNVELGEVNILKSARIENAPWAHTVIDSAAGPLLIAGEVDGRRIAVLGFDTHDSDLPLNISFPLLIANLVGYLAPGT GGDSAILPPDQELAFAVTNDISGVRLIQPDGETHEATPNNGLISFDGSLMNQAGIYSVELLRDGVVSKTQRYVVNAYRES EAKITPVQVLDVAQIGGGQVGSSETTQAKAGREEWWRWLALAALIFVLIEWVFAQRSAFTRLKLWWNARRSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022933 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 68311; Mature: 68179
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIAPLMFIAGGTVLAGIVAMYILRLRREERTVSSTFLWNQLVRDVEANAPWQRLRHNW CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLWLQLLIALLLAFALARPFSPTVGVSGQNLIVIIDRSASMGATDVAANRLEAAKAEAIR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LVDQLPDGARATIMAIGGELDVPAAATTDRREIRDAIEGIELRLGGGSDMSQALSLAGAL HHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHH AAREEESEVAILTDGQVTVPMSATLPAKIRYFPVGTSNNNQAIAAIALNELAPGTLTFFA HCCCCCCCEEEEECCEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEE RVTNEGQERVTRRLLVNLDGTLFNAYDLEILPGQDQTVNIDVPATATTVEARLDGSDSLP EHHCCHHHHHHHHHHEECCCEEEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCC SDDVAWAIRPSSDAIPVRFVTPGNRFLATALGLMPRVQVSAYLTETATFTDTALLTVLDA CCCCEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHC SLPEPLPAGNLLFIAPYRSTEYFSVTGSLDRPVPRPAPTDDPLLRNVELGEVNILKSARI CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCEEEEHHCCC ENAPWAHTVIDSAAGPLLIAGEVDGRRIAVLGFDTHDSDLPLNISFPLLIANLVGYLAPG CCCCCHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCC TGGDSAILPPDQELAFAVTNDISGVRLIQPDGETHEATPNNGLISFDGSLMNQAGIYSVE CCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEECCHHHCCCCCEEHH LLRDGVVSKTQRYVVNAYRESEAKITPVQVLDVAQIGGGQVGSSETTQAKAGREEWWRWL HHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCCCHHHHCCHHHHHHHH ALAALIFVLIEWVFAQRSAFTRLKLWWNARRSAA HHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC >Mature Secondary Structure GFIAPLMFIAGGTVLAGIVAMYILRLRREERTVSSTFLWNQLVRDVEANAPWQRLRHNW CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLWLQLLIALLLAFALARPFSPTVGVSGQNLIVIIDRSASMGATDVAANRLEAAKAEAIR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LVDQLPDGARATIMAIGGELDVPAAATTDRREIRDAIEGIELRLGGGSDMSQALSLAGAL HHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHH AAREEESEVAILTDGQVTVPMSATLPAKIRYFPVGTSNNNQAIAAIALNELAPGTLTFFA HCCCCCCCEEEEECCEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEE RVTNEGQERVTRRLLVNLDGTLFNAYDLEILPGQDQTVNIDVPATATTVEARLDGSDSLP EHHCCHHHHHHHHHHEECCCEEEEEEEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCC SDDVAWAIRPSSDAIPVRFVTPGNRFLATALGLMPRVQVSAYLTETATFTDTALLTVLDA CCCCEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHC SLPEPLPAGNLLFIAPYRSTEYFSVTGSLDRPVPRPAPTDDPLLRNVELGEVNILKSARI CCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCEEEEHHCCC ENAPWAHTVIDSAAGPLLIAGEVDGRRIAVLGFDTHDSDLPLNISFPLLIANLVGYLAPG CCCCCHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCC TGGDSAILPPDQELAFAVTNDISGVRLIQPDGETHEATPNNGLISFDGSLMNQAGIYSVE CCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEECCHHHCCCCCEEHH LLRDGVVSKTQRYVVNAYRESEAKITPVQVLDVAQIGGGQVGSSETTQAKAGREEWWRWL HHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCCCCCCCHHHHCCHHHHHHHH ALAALIFVLIEWVFAQRSAFTRLKLWWNARRSAA HHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA