| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896774
Identifier: 159896774
GI number: 159896774
Start: 275916
End: 276716
Strand: Reverse
Name: 159896774
Synonym: Haur_0241
Alternate gene names: NA
Gene position: 276716-275916 (Counterclockwise)
Preceding gene: 159896775
Following gene: 159896773
Centisome position: 4.36
GC content: 48.69
Gene sequence:
>801_bases ATGTTTGATTCATGGCGCAGTTTAGGCTTTCATCTAGCGGCAGGGTTTTACAACAGCGTTTTATGCGTGGTTATCGGCGG AATTCTGGGGTTTCTTACGCCACCGCCATGGTCATTTGCGCTGCTTGGCATCGCTTGGCTGGGCATTAGTGCCTATTGGG CTGGCGCTACTGATGGCCGTATTAGTAGTAGTTTCGCAGGCATGATTATTATCTGGCATGTGGTTATTTTGATGTTTGCA GGCATGGGCTGGCGCTATATGCGCTATACCGCTGGCAAAGAAACTATCAACAACATTACTGCTGCCGAAATCCCCTATTA TCCAAATGGTGCAATCTTTTACTTCAATGATGCTGTGGTACAAACCAACTATGCCACCGTCCACAAAGTTGCCAGCAAAG ATCGCAAAAGCTCACGCATCACCTACAGTTACTACAGTCTTGCGCCACTGACCACCAGCGATTGGCAATATGGTGACCCT GTGCCTGCTTGGGCCGCTTGCAATGCCGATTACAACATCGCTTGCTACGATTGGGATGAGCCGATTCGTAATGGCGCGTT GCCCGAAGAACTGTACCTTGATAAATACACCGTTGCCAAGCTCACAAACCTTGCCACATACGATTATGTAGAGCTAAACA ACGCTTCAATGCTAGAAGTTGGCTCAGGCTCGAATAGCTTCAACACCGCCAAACGCTGGCAATGGCTATTCGTGTGGATC ATCATGGTTTTGGTCTGGGCCGTGCCAATTGTGCTGATCGGTTGTGTACGCTTTACATGGCGTTGGTTGCGCAATAAATA G
Upstream 100 bases:
>100_bases TTTGTGCTATTCCCCCAACCAGTGATCGCCTAGTACACTAAAACCCTTGCTAGCTAGCTGCGTACCTAGCACACAGCAAT GCAGCGAAAGGAGCCAGAGC
Downstream 100 bases:
>100_bases ATAAGGAACAAATGATGAAAATTCAATGGCTAAACTTTGGGCGCACGTTGATAGTAGGGATACTGTTTGGTTTGTGGTGT GCAGTTCTGGGTGGGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MFDSWRSLGFHLAAGFYNSVLCVVIGGILGFLTPPPWSFALLGIAWLGISAYWAGATDGRISSSFAGMIIIWHVVILMFA GMGWRYMRYTAGKETINNITAAEIPYYPNGAIFYFNDAVVQTNYATVHKVASKDRKSSRITYSYYSLAPLTTSDWQYGDP VPAWAACNADYNIACYDWDEPIRNGALPEELYLDKYTVAKLTNLATYDYVELNNASMLEVGSGSNSFNTAKRWQWLFVWI IMVLVWAVPIVLIGCVRFTWRWLRNK
Sequences:
>Translated_266_residues MFDSWRSLGFHLAAGFYNSVLCVVIGGILGFLTPPPWSFALLGIAWLGISAYWAGATDGRISSSFAGMIIIWHVVILMFA GMGWRYMRYTAGKETINNITAAEIPYYPNGAIFYFNDAVVQTNYATVHKVASKDRKSSRITYSYYSLAPLTTSDWQYGDP VPAWAACNADYNIACYDWDEPIRNGALPEELYLDKYTVAKLTNLATYDYVELNNASMLEVGSGSNSFNTAKRWQWLFVWI IMVLVWAVPIVLIGCVRFTWRWLRNK >Mature_266_residues MFDSWRSLGFHLAAGFYNSVLCVVIGGILGFLTPPPWSFALLGIAWLGISAYWAGATDGRISSSFAGMIIIWHVVILMFA GMGWRYMRYTAGKETINNITAAEIPYYPNGAIFYFNDAVVQTNYATVHKVASKDRKSSRITYSYYSLAPLTTSDWQYGDP VPAWAACNADYNIACYDWDEPIRNGALPEELYLDKYTVAKLTNLATYDYVELNNASMLEVGSGSNSFNTAKRWQWLFVWI IMVLVWAVPIVLIGCVRFTWRWLRNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30129; Mature: 30129
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDSWRSLGFHLAAGFYNSVLCVVIGGILGFLTPPPWSFALLGIAWLGISAYWAGATDGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCC ISSSFAGMIIIWHVVILMFAGMGWRYMRYTAGKETINNITAAEIPYYPNGAIFYFNDAVV CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCEECCCCCCCEEEEEECEEE QTNYATVHKVASKDRKSSRITYSYYSLAPLTTSDWQYGDPVPAWAACNADYNIACYDWDE ECCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCH PIRNGALPEELYLDKYTVAKLTNLATYDYVELNNASMLEVGSGSNSFNTAKRWQWLFVWI HHHCCCCCHHHHHCHHHHHHHHHHCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHH IMVLVWAVPIVLIGCVRFTWRWLRNK HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFDSWRSLGFHLAAGFYNSVLCVVIGGILGFLTPPPWSFALLGIAWLGISAYWAGATDGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCC ISSSFAGMIIIWHVVILMFAGMGWRYMRYTAGKETINNITAAEIPYYPNGAIFYFNDAVV CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCEECCCCCCCEEEEEECEEE QTNYATVHKVASKDRKSSRITYSYYSLAPLTTSDWQYGDPVPAWAACNADYNIACYDWDE ECCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCEEEEECCCH PIRNGALPEELYLDKYTVAKLTNLATYDYVELNNASMLEVGSGSNSFNTAKRWQWLFVWI HHHCCCCCHHHHHCHHHHHHHHHHCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHH IMVLVWAVPIVLIGCVRFTWRWLRNK HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA