| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896725
Identifier: 159896725
GI number: 159896725
Start: 223097
End: 225274
Strand: Direct
Name: 159896725
Synonym: Haur_0192
Alternate gene names: NA
Gene position: 223097-225274 (Clockwise)
Preceding gene: 159896724
Following gene: 159896726
Centisome position: 3.52
GC content: 52.53
Gene sequence:
>2178_bases ATGACGACCGCTGATCCTGCTGCACTGCTTGTCGTTGATATTGGCACGTTATTTACTCACGTGGCGCTGCTCGAACTGGT TGCAGGCGAGTACCGTTTGTTGGGTCGTGCCCAAGCGCTCTCAACCCTGGAGCCACCAATTGCCGATGCATGGCATGGTA TTTTGGCCGCGATTCGCGAAATTGAGCAATTAACATTCCGTGCGATTGCCCATGTCGATGGTTTGATGACCCCCCATCGT GCTGATGGTTCAGGTGTTGATGGTATGGTGGTAACTACTAGCGCTGCTGGTACGTTGCCAATTGTTTTGGCTGCCATTTC CAACGATACCACTGGCGCTAGTTTGCGACGGGTTGCCCGTTCGAGCTATACCACGGTGCTCGATATGGTCACGCTTGATG AATATGGTGACCCCGATTTAGCCGAAGGCGAAAGTTGGATCGATTATCAATTGGCCAATTTGGTGCGCTTGCCTGCTGCA ACCGTGCTGCTGGCTGGTGGAATCGATGGCGGCAACTCGGCTCCGCTTGAGCGTTTGGCCCACATGCTGGGCTTTACCGT CTTACGGCTTGAACAAATTAATTCGCGTGAGTTCGCCCATGTAATTTTTGCGGGCAATACCGCTGCCTACCCTGGCATCG AGGAGGCTCTTTCCACGATTGCGCCAATTACTGCTACTGCGAATGTGTTGCCTGCGATTGGGGTTGAACAATTGATGCCA GCTCGCTTGGAATTAATTCGTTCGTACAATGATCGCGTCTTGCCAAAACTGCCAAGTTTCAACCGCATGCGAGCCATGAG CAGCGATATGATTCGTTGTACCAGCGATGGTTTTGGTCCATTGGTGCGCTTTATCGCTAAACATCATGGCCGGAATACCT TGATTGTTGATATTGGTGCGATGACGAGCGCTGGCTATGCTTCCGACGGAACTCAATTGCACCTGACCGTCGAGACCAAT TGTGGCACGGCCTATGGCATTGCGGGCTTGGTCGATAAGGTAGGAGTGACCAATATCACCCGTTGGCTGCCGTTTGAAAT GAGCGATTCGGCTTTACGCGAACATATGCTCAATCGGCTGATTCGTCCGCAAATTGTGCCGATTGACCGCGAAAGTTTGT TGATTGAGCAAGCTTTGGTGCGCGAAGCCCTGCGCGTTGTCTCGAACGATTTGTTTGATGAACAGCCTCAATTAGCCAGC GATTTGATTATTGCAACTGGTGGAGCGCTGACCCACACCATGCATCCGGCTCAAGCCTTGCTAAGCATCGTTGATGGGCT GGATTTTGGGCGCTTGCAACAATATCGTGATCGCAGTTTGCTGATTAGCGATATTTACCTTGATCGTGATGGTTTGCTCG CCTTGTGTGGCGCGACTGCTTGGAAATATCCTGATGCAAGTTTTTGTTTGCTCGAACAAGATGTATTGCGTAATGGTGCT TTAGCCAGCTATCTGGCGATCAATAGTTCATTGCGTTTGGGCGATTTGGTGGCGGAAGTCGAGCTTGTGCCCGTCAGCGG CGCTCCGATCATCATGCAAATTCATCATGGTGAGATTCGGCGCTTACCATTGGCGCTGGGTAAACGTGCTACCCTGCGTT TGCGCCCAACCAAACAAGTGCAAATTGGGGCAAATTTACCAGGCGAAGTCGTCGAAACTGGCTTGGCTGCGATTACCGGT AGCGCATTGGGCTTGGTAATTGATGCCCGCCCACGACCTTTGGCTCAACGCAATAGCGATATCCCAAGCCGCAATCAACA ATGGCAATGGCTCAATCAATTGGGCGTGGTCGATGGGCTTAATCCTTATGCGCCGCAGTATGATGATCAACCGCTGCCGT TTGAAATGGCTCCTGCGCTCACCCGCATTCCCGATCCAGCACCAGCGCCAGCCCAAATGCTACCTGAACGCGAAGAACCC AATGCGATTCCCGATTGGCTGCGCGAAGAAGGCGAGAACGCCAACGATCTGACCATGCCGCCACCAAGCGATTTTGGGGT TGAAGAACCCTTACCCGATTGGCTGGGCGGGATGGATGTGCCGGTCAGCAGTGATCCAGTGCTCGATTTGGGTGAACGCC GACCATCGCAACCAATCGCTCCTGCCGACTTTAGCGCCCTGCGCAACGAGTTGGAAGAACAAAATAAACCCAAACGTGGC TTCTTCCGCCGCAAGTAA
Upstream 100 bases:
>100_bases GCTACGCTGATCACCTATCAATCAGCCTTGATTGATCGAATTCAGTTTTTGCTGCGGCAAATAATAGGCGTGATCTCTTA GGGGTTGCGAAAGGATTGAT
Downstream 100 bases:
>100_bases ATCAATGCTGATCCGACTAACCTTATGTTTGGTTGGTCGGATTGGCTTAATCCCGCCAAAAATCCCCCACAGAATCGGCA CTTTTCCCACAAAAGGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 725; Mature: 724
Protein sequence:
>725_residues MTTADPAALLVVDIGTLFTHVALLELVAGEYRLLGRAQALSTLEPPIADAWHGILAAIREIEQLTFRAIAHVDGLMTPHR ADGSGVDGMVVTTSAAGTLPIVLAAISNDTTGASLRRVARSSYTTVLDMVTLDEYGDPDLAEGESWIDYQLANLVRLPAA TVLLAGGIDGGNSAPLERLAHMLGFTVLRLEQINSREFAHVIFAGNTAAYPGIEEALSTIAPITATANVLPAIGVEQLMP ARLELIRSYNDRVLPKLPSFNRMRAMSSDMIRCTSDGFGPLVRFIAKHHGRNTLIVDIGAMTSAGYASDGTQLHLTVETN CGTAYGIAGLVDKVGVTNITRWLPFEMSDSALREHMLNRLIRPQIVPIDRESLLIEQALVREALRVVSNDLFDEQPQLAS DLIIATGGALTHTMHPAQALLSIVDGLDFGRLQQYRDRSLLISDIYLDRDGLLALCGATAWKYPDASFCLLEQDVLRNGA LASYLAINSSLRLGDLVAEVELVPVSGAPIIMQIHHGEIRRLPLALGKRATLRLRPTKQVQIGANLPGEVVETGLAAITG SALGLVIDARPRPLAQRNSDIPSRNQQWQWLNQLGVVDGLNPYAPQYDDQPLPFEMAPALTRIPDPAPAPAQMLPEREEP NAIPDWLREEGENANDLTMPPPSDFGVEEPLPDWLGGMDVPVSSDPVLDLGERRPSQPIAPADFSALRNELEEQNKPKRG FFRRK
Sequences:
>Translated_725_residues MTTADPAALLVVDIGTLFTHVALLELVAGEYRLLGRAQALSTLEPPIADAWHGILAAIREIEQLTFRAIAHVDGLMTPHR ADGSGVDGMVVTTSAAGTLPIVLAAISNDTTGASLRRVARSSYTTVLDMVTLDEYGDPDLAEGESWIDYQLANLVRLPAA TVLLAGGIDGGNSAPLERLAHMLGFTVLRLEQINSREFAHVIFAGNTAAYPGIEEALSTIAPITATANVLPAIGVEQLMP ARLELIRSYNDRVLPKLPSFNRMRAMSSDMIRCTSDGFGPLVRFIAKHHGRNTLIVDIGAMTSAGYASDGTQLHLTVETN CGTAYGIAGLVDKVGVTNITRWLPFEMSDSALREHMLNRLIRPQIVPIDRESLLIEQALVREALRVVSNDLFDEQPQLAS DLIIATGGALTHTMHPAQALLSIVDGLDFGRLQQYRDRSLLISDIYLDRDGLLALCGATAWKYPDASFCLLEQDVLRNGA LASYLAINSSLRLGDLVAEVELVPVSGAPIIMQIHHGEIRRLPLALGKRATLRLRPTKQVQIGANLPGEVVETGLAAITG SALGLVIDARPRPLAQRNSDIPSRNQQWQWLNQLGVVDGLNPYAPQYDDQPLPFEMAPALTRIPDPAPAPAQMLPEREEP NAIPDWLREEGENANDLTMPPPSDFGVEEPLPDWLGGMDVPVSSDPVLDLGERRPSQPIAPADFSALRNELEEQNKPKRG FFRRK >Mature_724_residues TTADPAALLVVDIGTLFTHVALLELVAGEYRLLGRAQALSTLEPPIADAWHGILAAIREIEQLTFRAIAHVDGLMTPHRA DGSGVDGMVVTTSAAGTLPIVLAAISNDTTGASLRRVARSSYTTVLDMVTLDEYGDPDLAEGESWIDYQLANLVRLPAAT VLLAGGIDGGNSAPLERLAHMLGFTVLRLEQINSREFAHVIFAGNTAAYPGIEEALSTIAPITATANVLPAIGVEQLMPA RLELIRSYNDRVLPKLPSFNRMRAMSSDMIRCTSDGFGPLVRFIAKHHGRNTLIVDIGAMTSAGYASDGTQLHLTVETNC GTAYGIAGLVDKVGVTNITRWLPFEMSDSALREHMLNRLIRPQIVPIDRESLLIEQALVREALRVVSNDLFDEQPQLASD LIIATGGALTHTMHPAQALLSIVDGLDFGRLQQYRDRSLLISDIYLDRDGLLALCGATAWKYPDASFCLLEQDVLRNGAL ASYLAINSSLRLGDLVAEVELVPVSGAPIIMQIHHGEIRRLPLALGKRATLRLRPTKQVQIGANLPGEVVETGLAAITGS ALGLVIDARPRPLAQRNSDIPSRNQQWQWLNQLGVVDGLNPYAPQYDDQPLPFEMAPALTRIPDPAPAPAQMLPEREEPN AIPDWLREEGENANDLTMPPPSDFGVEEPLPDWLGGMDVPVSSDPVLDLGERRPSQPIAPADFSALRNELEEQNKPKRGF FRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78684; Mature: 78553
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTADPAALLVVDIGTLFTHVALLELVAGEYRLLGRAQALSTLEPPIADAWHGILAAIRE CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IEQLTFRAIAHVDGLMTPHRADGSGVDGMVVTTSAAGTLPIVLAAISNDTTGASLRRVAR HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHH SSYTTVLDMVTLDEYGDPDLAEGESWIDYQLANLVRLPAATVLLAGGIDGGNSAPLERLA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHH HMLGFTVLRLEQINSREFAHVIFAGNTAAYPGIEEALSTIAPITATANVLPAIGVEQLMP HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHH ARLELIRSYNDRVLPKLPSFNRMRAMSSDMIRCTSDGFGPLVRFIAKHHGRNTLIVDIGA HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCEEEEEECC MTSAGYASDGTQLHLTVETNCGTAYGIAGLVDKVGVTNITRWLPFEMSDSALREHMLNRL CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHH IRPQIVPIDRESLLIEQALVREALRVVSNDLFDEQPQLASDLIIATGGALTHTMHPAQAL CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEECCCHHHHCCCHHHHH LSIVDGLDFGRLQQYRDRSLLISDIYLDRDGLLALCGATAWKYPDASFCLLEQDVLRNGA HHHHCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCEEHCCHHHHHCCC LASYLAINSSLRLGDLVAEVELVPVSGAPIIMQIHHGEIRRLPLALGKRATLRLRPTKQV HHHHHHHCCCCCHHHHEEEEEEEEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCEE QIGANLPGEVVETGLAAITGSALGLVIDARPRPLAQRNSDIPSRNQQWQWLNQLGVVDGL EECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCC NPYAPQYDDQPLPFEMAPALTRIPDPAPAPAQMLPEREEPNAIPDWLREEGENANDLTMP CCCCCCCCCCCCCHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC PPSDFGVEEPLPDWLGGMDVPVSSDPVLDLGERRPSQPIAPADFSALRNELEEQNKPKRG CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC FFRRK CCCCC >Mature Secondary Structure TTADPAALLVVDIGTLFTHVALLELVAGEYRLLGRAQALSTLEPPIADAWHGILAAIRE CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IEQLTFRAIAHVDGLMTPHRADGSGVDGMVVTTSAAGTLPIVLAAISNDTTGASLRRVAR HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHH SSYTTVLDMVTLDEYGDPDLAEGESWIDYQLANLVRLPAATVLLAGGIDGGNSAPLERLA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHH HMLGFTVLRLEQINSREFAHVIFAGNTAAYPGIEEALSTIAPITATANVLPAIGVEQLMP HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHH ARLELIRSYNDRVLPKLPSFNRMRAMSSDMIRCTSDGFGPLVRFIAKHHGRNTLIVDIGA HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCEEEEEECC MTSAGYASDGTQLHLTVETNCGTAYGIAGLVDKVGVTNITRWLPFEMSDSALREHMLNRL CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHH IRPQIVPIDRESLLIEQALVREALRVVSNDLFDEQPQLASDLIIATGGALTHTMHPAQAL CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEECCCHHHHCCCHHHHH LSIVDGLDFGRLQQYRDRSLLISDIYLDRDGLLALCGATAWKYPDASFCLLEQDVLRNGA HHHHCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCEEHCCHHHHHCCC LASYLAINSSLRLGDLVAEVELVPVSGAPIIMQIHHGEIRRLPLALGKRATLRLRPTKQV HHHHHHHCCCCCHHHHEEEEEEEEECCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCEE QIGANLPGEVVETGLAAITGSALGLVIDARPRPLAQRNSDIPSRNQQWQWLNQLGVVDGL EECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCC NPYAPQYDDQPLPFEMAPALTRIPDPAPAPAQMLPEREEPNAIPDWLREEGENANDLTMP CCCCCCCCCCCCCHHHCCHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC PPSDFGVEEPLPDWLGGMDVPVSSDPVLDLGERRPSQPIAPADFSALRNELEEQNKPKRG CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC FFRRK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA