Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is fdxA [H]

Identifier: 159896706

GI number: 159896706

Start: 202673

End: 202906

Strand: Reverse

Name: fdxA [H]

Synonym: Haur_0173

Alternate gene names: 159896706

Gene position: 202906-202673 (Counterclockwise)

Preceding gene: 159896709

Following gene: 159896705

Centisome position: 3.2

GC content: 47.01

Gene sequence:

>234_bases
ATGGCCTACGTAATTGCAGAACCATGTGTCGGCACCAAAGATTCAGCCTGTGTCAAAGTTTGCCCAGTTGACTGTATCTA
TGAAGGTGAAGACCAATACTATATCAACCCCGACGAATGTATCGATTGTGGCGCTTGTGAACCAGAATGCCCAGTCAGCG
CAATTTTCTCAAGCGACAGTGTACCCGAACAATGGGCCTCATACACCCAAAAGAACGTCGATTTCTTCGGTTAG

Upstream 100 bases:

>100_bases
ATTATGTGACTAAAGTTACAGAAGCATGGCGAGGAGCTTGCTACACTAACTATAGAAAACAAGTATGAAGTTTACGCCTC
AGCGCGAAGGAGTATCAACA

Downstream 100 bases:

>100_bases
TTCTGAGCGAAGCCAACCGACTCTCAGGGACACGGACATTTCCGTGTCCCTGTTATTTATTAAATTGAGGTTGCGATGCT
GCGTTTTCCGGTAGTCTGTT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: Seven-iron ferredoxin [H]

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MAYVIAEPCVGTKDSACVKVCPVDCIYEGEDQYYINPDECIDCGACEPECPVSAIFSSDSVPEQWASYTQKNVDFFG

Sequences:

>Translated_77_residues
MAYVIAEPCVGTKDSACVKVCPVDCIYEGEDQYYINPDECIDCGACEPECPVSAIFSSDSVPEQWASYTQKNVDFFG
>Mature_76_residues
AYVIAEPCVGTKDSACVKVCPVDCIYEGEDQYYINPDECIDCGACEPECPVSAIFSSDSVPEQWASYTQKNVDFFG

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 8445; Mature: 8314

Theoretical pI: Translated: 3.52; Mature: 3.52

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
11.7 %Cys+Met (Translated Protein)
10.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYVIAEPCVGTKDSACVKVCPVDCIYEGEDQYYINPDECIDCGACEPECPVSAIFSSDS
CCEEECCCCCCCCCCCEEEECCCEEEEECCCCEEECHHHCEECCCCCCCCCEEEEECCCC
VPEQWASYTQKNVDFFG
CCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AYVIAEPCVGTKDSACVKVCPVDCIYEGEDQYYINPDECIDCGACEPECPVSAIFSSDS
CEEECCCCCCCCCCCEEEECCCEEEEECCCCEEECHHHCEECCCCCCCCCEEEEECCCC
VPEQWASYTQKNVDFFG
CCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8003034; 1338329; 9657695; 9276454 [H]