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The map label for this gene is nusG [H]

Identifier: 159896654

GI number: 159896654

Start: 154517

End: 155083

Strand: Direct

Name: nusG [H]

Synonym: Haur_0121

Alternate gene names: 159896654

Gene position: 154517-155083 (Clockwise)

Preceding gene: 159896653

Following gene: 159896655

Centisome position: 2.43

GC content: 45.5

Gene sequence:

>567_bases
ATGTCTGACAACGAAGAAGAAAAATCCACTACTCCCGAAGGTGTCCATTGGTACGTAATTCATACCTATTCAGGCTATGA
AAACAAAGTGATGCAAAATCTCCGTCATCGGATTGAATCGATGGACATGCGGAACCAAATTTTCCGTGTGGTCGTGCCAA
CCGAAGAAGAGATTGAAATCAAAAATGGGCAACGTCGGACTGTTCAAAAAAAGGTGTTTCCTGGCTATGTGCTCGTTCAA
ATGGCCATGACCGACGATTCGTGGTATGTGGTGCGTAATACACCAGGTGTCACCTCGTTTGTGGGCATGGGAACTAAGCC
ATCACCATTGGCCGATGAAGAAGTACGCTTTATTCTGAAGCAAATGGAAGAAGAAGCACCCAAAGTTAAGGTCAACTACG
AAATTGGCCAAACTGTCAAAATTACCGATGGCCCCTTCACCGACTTTGAAGGTGTGGTCGATGAGATTGACGAAGAACGT
GGGCGCGTGCGCGTGCTTGTCTCGTTCTTTGGCCGTGAAGCTCCAGTTGAACTTGATTTCTTACAAGTTATTCGCGTTAT
AGAATAA

Upstream 100 bases:

>100_bases
ATTTCGTTGTTGGTTGGGTCGATTCTAGCAGTCTTCGACTTGCTATTTGAAACGCTGGTGCGGCTGATCCAATAATTACC
CGCCGACTGCGAGGCTCAGA

Downstream 100 bases:

>100_bases
ACACCCGCGACACCTAGTTCGCGAAGGAGTCCTCTGTGGCAAAGAAAGTAACCGCAGTCGTTAAGTTGCAATTGCCTGCT
GGTAAAGCAACGCCTGCACC

Product: NusG antitermination factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSDNEEEKSTTPEGVHWYVIHTYSGYENKVMQNLRHRIESMDMRNQIFRVVVPTEEEIEIKNGQRRTVQKKVFPGYVLVQ
MAMTDDSWYVVRNTPGVTSFVGMGTKPSPLADEEVRFILKQMEEEAPKVKVNYEIGQTVKITDGPFTDFEGVVDEIDEER
GRVRVLVSFFGREAPVELDFLQVIRVIE

Sequences:

>Translated_188_residues
MSDNEEEKSTTPEGVHWYVIHTYSGYENKVMQNLRHRIESMDMRNQIFRVVVPTEEEIEIKNGQRRTVQKKVFPGYVLVQ
MAMTDDSWYVVRNTPGVTSFVGMGTKPSPLADEEVRFILKQMEEEAPKVKVNYEIGQTVKITDGPFTDFEGVVDEIDEER
GRVRVLVSFFGREAPVELDFLQVIRVIE
>Mature_187_residues
SDNEEEKSTTPEGVHWYVIHTYSGYENKVMQNLRHRIESMDMRNQIFRVVVPTEEEIEIKNGQRRTVQKKVFPGYVLVQM
AMTDDSWYVVRNTPGVTSFVGMGTKPSPLADEEVRFILKQMEEEAPKVKVNYEIGQTVKITDGPFTDFEGVVDEIDEERG
RVRVLVSFFGREAPVELDFLQVIRVIE

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=171, Percent_Identity=48.5380116959064, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21779; Mature: 21648

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNEEEKSTTPEGVHWYVIHTYSGYENKVMQNLRHRIESMDMRNQIFRVVVPTEEEIEI
CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCEEE
KNGQRRTVQKKVFPGYVLVQMAMTDDSWYVVRNTPGVTSFVGMGTKPSPLADEEVRFILK
CCCCCHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHH
QMEEEAPKVKVNYEIGQTVKITDGPFTDFEGVVDEIDEERGRVRVLVSFFGREAPVELDF
HHHHCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCCCCCHHH
LQVIRVIE
HHHHHHCC
>Mature Secondary Structure 
SDNEEEKSTTPEGVHWYVIHTYSGYENKVMQNLRHRIESMDMRNQIFRVVVPTEEEIEI
CCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCEEE
KNGQRRTVQKKVFPGYVLVQMAMTDDSWYVVRNTPGVTSFVGMGTKPSPLADEEVRFILK
CCCCCHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHH
QMEEEAPKVKVNYEIGQTVKITDGPFTDFEGVVDEIDEERGRVRVLVSFFGREAPVELDF
HHHHCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEHHCCCCCCCHHH
LQVIRVIE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]