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The map label for this gene is 159896621

Identifier: 159896621

GI number: 159896621

Start: 113386

End: 114111

Strand: Direct

Name: 159896621

Synonym: Haur_0088

Alternate gene names: NA

Gene position: 113386-114111 (Clockwise)

Preceding gene: 159896617

Following gene: 159896622

Centisome position: 1.79

GC content: 54.13

Gene sequence:

>726_bases
GTGGCGGCGTTTCATGGCTTCTCAACTGAGAATCTCGTGCCGCTACCGGCAGAATTCTTTAGCGATGTTCTCCCTTCAAT
CAGCAACTTGGCTGAACTCAAAGTAACCCTGCATGTCTTTTGGTTGGTTAGCCAGCAACGTGGCCGCGCCAAACGCGTTT
CGTGGGATGCACTGAGCAGCGATAGTGCCCTGGCGCAATCGTTGCGGGCCGTCTCGCAGTTGCGCCCAACTAGCGATGTT
TTAGAAGAAGCCTTGGGTTTGGCGGTTGAGCGGGGCACATTACTGCACTTAATCAGCCCCGAACCTGGCCGCGTGGTTAG
TTGGTATTTGGTCAATACCCAAGCCAATCGGCATTGGGTCGAGCGCCAAGCAGGCCAGCGTGTGCTTGCACCCGAGGCTA
GCCCGACGGCGCAGCCAACCATTTTTGGGCTTTACGAACAAAATATTGGCCTGCTCACGCCACTGCTGATTGAGCAATTG
CACGAGGCTAGTGCCAAATATCCCGCTGTATGGCTCGAAGAAGCCATTGCCAAAGCGGTTGAAGCCAATGTGCGCAATTG
GCGCTACATTCGGCGCATTCTAGAACGGTGGGAAACCGATGGAAAAGAATCTACGTCGCATCGATCCGAGCAGCTTTTCG
ATCTCAGCAAATATACCACGGGCAAATATGCCGCCCTCTTCGGAAGAAGCGGCGATTCCGATGGAGGAGACTTGTCCGAT
TTGTAA

Upstream 100 bases:

>100_bases
GGTGAGGGAAGATCAACTTGGATGGGTGGTCGCAAGCGTTGCGGCATGTGGTATCATTGATGCTAGATAAATCGCGCAGT
GCTACTTTTGGAGGCAACCC

Downstream 100 bases:

>100_bases
GGGCGCTGGCTATTTCTGCATGGATGTGCCGATTAACGACCCGAACTTTGGCCATTTGATTACCTGCCAATGTAAACTTG
CCGAAAAAGAAGGCCGCCAA

Product: primosome, DnaD subunit

Products: NA

Alternate protein names: Primosome Subunit DNAD; Primosome Component; DNAD/Phage-Associated Domain Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAAFHGFSTENLVPLPAEFFSDVLPSISNLAELKVTLHVFWLVSQQRGRAKRVSWDALSSDSALAQSLRAVSQLRPTSDV
LEEALGLAVERGTLLHLISPEPGRVVSWYLVNTQANRHWVERQAGQRVLAPEASPTAQPTIFGLYEQNIGLLTPLLIEQL
HEASAKYPAVWLEEAIAKAVEANVRNWRYIRRILERWETDGKESTSHRSEQLFDLSKYTTGKYAALFGRSGDSDGGDLSD
L

Sequences:

>Translated_241_residues
MAAFHGFSTENLVPLPAEFFSDVLPSISNLAELKVTLHVFWLVSQQRGRAKRVSWDALSSDSALAQSLRAVSQLRPTSDV
LEEALGLAVERGTLLHLISPEPGRVVSWYLVNTQANRHWVERQAGQRVLAPEASPTAQPTIFGLYEQNIGLLTPLLIEQL
HEASAKYPAVWLEEAIAKAVEANVRNWRYIRRILERWETDGKESTSHRSEQLFDLSKYTTGKYAALFGRSGDSDGGDLSD
L
>Mature_240_residues
AAFHGFSTENLVPLPAEFFSDVLPSISNLAELKVTLHVFWLVSQQRGRAKRVSWDALSSDSALAQSLRAVSQLRPTSDVL
EEALGLAVERGTLLHLISPEPGRVVSWYLVNTQANRHWVERQAGQRVLAPEASPTAQPTIFGLYEQNIGLLTPLLIEQLH
EASAKYPAVWLEEAIAKAVEANVRNWRYIRRILERWETDGKESTSHRSEQLFDLSKYTTGKYAALFGRSGDSDGGDLSDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26869; Mature: 26737

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFHGFSTENLVPLPAEFFSDVLPSISNLAELKVTLHVFWLVSQQRGRAKRVSWDALSS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCC
DSALAQSLRAVSQLRPTSDVLEEALGLAVERGTLLHLISPEPGRVVSWYLVNTQANRHWV
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCHHHHH
ERQAGQRVLAPEASPTAQPTIFGLYEQNIGLLTPLLIEQLHEASAKYPAVWLEEAIAKAV
HHHHCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EANVRNWRYIRRILERWETDGKESTSHRSEQLFDLSKYTTGKYAALFGRSGDSDGGDLSD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCC
L
C
>Mature Secondary Structure 
AAFHGFSTENLVPLPAEFFSDVLPSISNLAELKVTLHVFWLVSQQRGRAKRVSWDALSS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCC
DSALAQSLRAVSQLRPTSDVLEEALGLAVERGTLLHLISPEPGRVVSWYLVNTQANRHWV
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCHHHHH
ERQAGQRVLAPEASPTAQPTIFGLYEQNIGLLTPLLIEQLHEASAKYPAVWLEEAIAKAV
HHHHCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
EANVRNWRYIRRILERWETDGKESTSHRSEQLFDLSKYTTGKYAALFGRSGDSDGGDLSD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA