| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896616
Identifier: 159896616
GI number: 159896616
Start: 108177
End: 109241
Strand: Direct
Name: 159896616
Synonym: Haur_0083
Alternate gene names: NA
Gene position: 108177-109241 (Clockwise)
Preceding gene: 159896615
Following gene: 159896617
Centisome position: 1.7
GC content: 55.87
Gene sequence:
>1065_bases GTGAGTTTTGCGCTACGCGAGCTTGATGCCGCTCAATGGTCGGCAGAACTAGCAGCCAATCCCGCTGTGCATCTTTTGCA ACGCGCTGAATGGGGCCAACTCAAAGCCCAATTTGGCTGGCAACCGCAACGCATCGCAATCTACAATCAGCATGGCTTTT GCGCCGGAGCACAAGTGTTGTGGCGTTCGCAATATGGTTTGCGGGTGGCCTATGTGCCGCGTGGCCCAGTTTGGTCGGCT GATCAGGCCGCTAATCGGTTGTTGTTGCAAAGCTTAGAGCGTTTGGCTCGCAAACGTTGGGCAGCCTTTTTGCGCTTGGA GCCAAATTTGCTCGATGCTGGAGCCGCTGATCAACTGCATTCTGAGTTGTTGCTGGCGGGCTACGAGCAATCGCGGAGTA TGCAGCCAAGCGCCTCAATTCACCTCGATCTCCAGCCAGAGTTGGCGAGCTTGCAAGCCCAATGTAGCAAAGGCCATCGC GCCGATGTGCGCCGCGCTGAGCGACAGGGCGTAAGCATTCGAGTTGGCACAACCGAAGCCGATCTCGATCAGTTTTATGC GATTATGCAAGCGACCAGCCAACGCGCTAATTTTGGCATTCACAGCCGCGAGTATTATGCGCAGGCTTGGCGCTTGTTTG GCGGTGATCAGGCTGATGGCGCGGCACGTTTGCTAATTGCTGAGCGCGAAGGTCGGGTGATTGGCAGCTTTTTGGTGTTT GCCCAAGGCACTGAAGCGCAATATATGTATAGCGGCACCAATGAAGAAGGCTTGAAATTTGCCGCCAGCCATGCTTTGCA ATGGGCGGCGATTACTTGGGCGAAGCAACGTGGCTGCACGCTCTACGATTTTTGGGGTATTCCCGAGGCCTTTTTAGCGC TTGAAGCCACGACTGACCCAGCGGAACGTGAACGCTTGGATCAAGCGGCCCAAGCGACGGGCATGGCGGGAGTCTATCGC TTTAAAAAAGGCTGGGGCGGTCAACCAGTCCGCTATCTGCCAGCCTATGATCGCGTTTTCTTGCGTCCGGCGTATTGGCT TTGGCAGCGTCGCCGCTCTGAATAG
Upstream 100 bases:
>100_bases TATTTGGCACAGTTGCGGCGATGGAGCAAGAGCTGAGCACGTATGCAGCGAGTGTTGCCGAACAAGGTTTTGCTGAACGC TTATGGCGGGGAGGCCTGGT
Downstream 100 bases:
>100_bases GAACAATCAATGAAATCGTTCGCTGAACTTTTGCTGCATGTTACCCATCAAGCTTCTGGCGATCACCACGTTGCAATTAG CAATGTAGCTTACGATTCGC
Product: methicillin resistance protein
Products: NA
Alternate protein names: FemAB Family Protein; FemA Protein; Peptidoglycan Interpeptide Bridge Formation Protein; FemA-Related Protein; Protein FemA; Protein Involved In Methicillin Resistance-Like Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSFALRELDAAQWSAELAANPAVHLLQRAEWGQLKAQFGWQPQRIAIYNQHGFCAGAQVLWRSQYGLRVAYVPRGPVWSA DQAANRLLLQSLERLARKRWAAFLRLEPNLLDAGAADQLHSELLLAGYEQSRSMQPSASIHLDLQPELASLQAQCSKGHR ADVRRAERQGVSIRVGTTEADLDQFYAIMQATSQRANFGIHSREYYAQAWRLFGGDQADGAARLLIAEREGRVIGSFLVF AQGTEAQYMYSGTNEEGLKFAASHALQWAAITWAKQRGCTLYDFWGIPEAFLALEATTDPAERERLDQAAQATGMAGVYR FKKGWGGQPVRYLPAYDRVFLRPAYWLWQRRRSE
Sequences:
>Translated_354_residues MSFALRELDAAQWSAELAANPAVHLLQRAEWGQLKAQFGWQPQRIAIYNQHGFCAGAQVLWRSQYGLRVAYVPRGPVWSA DQAANRLLLQSLERLARKRWAAFLRLEPNLLDAGAADQLHSELLLAGYEQSRSMQPSASIHLDLQPELASLQAQCSKGHR ADVRRAERQGVSIRVGTTEADLDQFYAIMQATSQRANFGIHSREYYAQAWRLFGGDQADGAARLLIAEREGRVIGSFLVF AQGTEAQYMYSGTNEEGLKFAASHALQWAAITWAKQRGCTLYDFWGIPEAFLALEATTDPAERERLDQAAQATGMAGVYR FKKGWGGQPVRYLPAYDRVFLRPAYWLWQRRRSE >Mature_353_residues SFALRELDAAQWSAELAANPAVHLLQRAEWGQLKAQFGWQPQRIAIYNQHGFCAGAQVLWRSQYGLRVAYVPRGPVWSAD QAANRLLLQSLERLARKRWAAFLRLEPNLLDAGAADQLHSELLLAGYEQSRSMQPSASIHLDLQPELASLQAQCSKGHRA DVRRAERQGVSIRVGTTEADLDQFYAIMQATSQRANFGIHSREYYAQAWRLFGGDQADGAARLLIAEREGRVIGSFLVFA QGTEAQYMYSGTNEEGLKFAASHALQWAAITWAKQRGCTLYDFWGIPEAFLALEATTDPAERERLDQAAQATGMAGVYRF KKGWGGQPVRYLPAYDRVFLRPAYWLWQRRRSE
Specific function: Unknown
COG id: COG2348
COG function: function code V; Uncharacterized protein involved in methicillin resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39925; Mature: 39794
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFALRELDAAQWSAELAANPAVHLLQRAEWGQLKAQFGWQPQRIAIYNQHGFCAGAQVL CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHH WRSQYGLRVAYVPRGPVWSADQAANRLLLQSLERLARKRWAAFLRLEPNLLDAGAADQLH HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHH SELLLAGYEQSRSMQPSASIHLDLQPELASLQAQCSKGHRADVRRAERQGVSIRVGTTEA HHHHHHCHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHH DLDQFYAIMQATSQRANFGIHSREYYAQAWRLFGGDQADGAARLLIAEREGRVIGSFLVF HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEE AQGTEAQYMYSGTNEEGLKFAASHALQWAAITWAKQRGCTLYDFWGIPEAFLALEATTDP ECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHEEEECCCCH AERERLDQAAQATGMAGVYRFKKGWGGQPVRYLPAYDRVFLRPAYWLWQRRRSE HHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFALRELDAAQWSAELAANPAVHLLQRAEWGQLKAQFGWQPQRIAIYNQHGFCAGAQVL CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHH WRSQYGLRVAYVPRGPVWSADQAANRLLLQSLERLARKRWAAFLRLEPNLLDAGAADQLH HHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHH SELLLAGYEQSRSMQPSASIHLDLQPELASLQAQCSKGHRADVRRAERQGVSIRVGTTEA HHHHHHCHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCHH DLDQFYAIMQATSQRANFGIHSREYYAQAWRLFGGDQADGAARLLIAEREGRVIGSFLVF HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEE AQGTEAQYMYSGTNEEGLKFAASHALQWAAITWAKQRGCTLYDFWGIPEAFLALEATTDP ECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHEEEECCCCH AERERLDQAAQATGMAGVYRFKKGWGGQPVRYLPAYDRVFLRPAYWLWQRRRSE HHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA