| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896614
Identifier: 159896614
GI number: 159896614
Start: 105986
End: 106990
Strand: Direct
Name: 159896614
Synonym: Haur_0081
Alternate gene names: NA
Gene position: 105986-106990 (Clockwise)
Preceding gene: 159896613
Following gene: 159896615
Centisome position: 1.67
GC content: 51.34
Gene sequence:
>1005_bases ATGACTGAAGAACAAAATGAACGCGATATTGAGGAAGCCTTGGCCGAAATTGGCGACCATAATCGCCCAATTGTCTTGAG TGAACTCAAAGTTTTTAACGACCTTGACCAAGATGAAACTGAGATTTTTGAAATTGAATGGCTGCGCATCGAGCCAAGTC ATCGGCGTAATTTGGCTCAAGCGATGCAAGAGGTTGGTGAGGCCAGCCTTGAGCTTGATTTTCGCGCCGTATTTAGCATT TTGCTGACCGACCAAGATCCTGCAATTCGCATTGCAGCAGTCAAAGGTATGGCCGAAGATACCCGCCGCTCAAGTTTGCG CCGTTTAAGCGAATTGCTTACAACCGATCCCGATGATGGGGTGCGAGCTAATGCGGCGATCACGCTTGGTGCTTGGGCTT TACGCGCAGGCGAAGGCAATCTCGATCAGCGTACCAGTAATGAATTATTGCAAACGCTCTGGGCCGTTTTTGATGATCGC CAAACCTCGACCTTGGTACGCCAACGCTTGTTGGAAACCTTGGGCTACTTGGCCGATAGCGATCCACGAGTCAATCAGGA AATTGGGGCAGCTCACCAACGACTTGATGATGGTTGGCAGGCCGCCGCGCTTTGTGCCATGGGTCGCACTGGCTTAGATC AATGGTTGCCAACAATTACAGCTAGTTTGCGTTCCCATGAGCCATTGTTACGTTTTGAGGCAGTGCGGGCCGCTGGTGAG CTTGGCGATTTAGCCGAATCGATTGTCAACCACGTGGCGCGGGCTACTGCTGATGGTGATGTTGAAGTTGCTACAACTGC GATTTGGGCATTGGGCCAAATTGGTGGCGCTGCTGCGCGACGCTTTCTCGAACAATTAGTCAACGATTCAGAGGGTGTTC GGCGTGAAGCCGCTGCCGAAGCACTCAAAGAATTGCAATTCTTCGACGATCCCATACAATCCTTGCCCCTCGACGACGAT GAGGACGAGGACGAATATTGGTATGGCGATGACGAGGACGAGTAA
Upstream 100 bases:
>100_bases TAAAAACCACCTCCTGTACGTCTCGTCCACAACGTGGAAGCGGGCTGAGCAAACAGTATCCGTGGTAGACTTAAACGCAA TGCTATCACGAAGGTGACCT
Downstream 100 bases:
>100_bases GCATAAAGTCAGAAGGCAAAAATCAAAAGGCAAAATTGGAGGTTCGGTAGTTAGGAATTGGGGATGAGATTTTTAGCGCA GAGGATGTGAAGAACATATG
Product: HEAT repeat-containing PBS lyase
Products: NA
Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; HEAT Domain-Containing Protein; PBS Lyase Heat-Like Repeat Domain Protein; Heat Domain-Containing Protein; Phycocyanin Alpha Phycocyanobilin Lyase Related Protein
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTEEQNERDIEEALAEIGDHNRPIVLSELKVFNDLDQDETEIFEIEWLRIEPSHRRNLAQAMQEVGEASLELDFRAVFSI LLTDQDPAIRIAAVKGMAEDTRRSSLRRLSELLTTDPDDGVRANAAITLGAWALRAGEGNLDQRTSNELLQTLWAVFDDR QTSTLVRQRLLETLGYLADSDPRVNQEIGAAHQRLDDGWQAAALCAMGRTGLDQWLPTITASLRSHEPLLRFEAVRAAGE LGDLAESIVNHVARATADGDVEVATTAIWALGQIGGAAARRFLEQLVNDSEGVRREAAAEALKELQFFDDPIQSLPLDDD EDEDEYWYGDDEDE
Sequences:
>Translated_334_residues MTEEQNERDIEEALAEIGDHNRPIVLSELKVFNDLDQDETEIFEIEWLRIEPSHRRNLAQAMQEVGEASLELDFRAVFSI LLTDQDPAIRIAAVKGMAEDTRRSSLRRLSELLTTDPDDGVRANAAITLGAWALRAGEGNLDQRTSNELLQTLWAVFDDR QTSTLVRQRLLETLGYLADSDPRVNQEIGAAHQRLDDGWQAAALCAMGRTGLDQWLPTITASLRSHEPLLRFEAVRAAGE LGDLAESIVNHVARATADGDVEVATTAIWALGQIGGAAARRFLEQLVNDSEGVRREAAAEALKELQFFDDPIQSLPLDDD EDEDEYWYGDDEDE >Mature_333_residues TEEQNERDIEEALAEIGDHNRPIVLSELKVFNDLDQDETEIFEIEWLRIEPSHRRNLAQAMQEVGEASLELDFRAVFSIL LTDQDPAIRIAAVKGMAEDTRRSSLRRLSELLTTDPDDGVRANAAITLGAWALRAGEGNLDQRTSNELLQTLWAVFDDRQ TSTLVRQRLLETLGYLADSDPRVNQEIGAAHQRLDDGWQAAALCAMGRTGLDQWLPTITASLRSHEPLLRFEAVRAAGEL GDLAESIVNHVARATADGDVEVATTAIWALGQIGGAAARRFLEQLVNDSEGVRREAAAEALKELQFFDDPIQSLPLDDDE DEDEYWYGDDEDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37250; Mature: 37119
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEQNERDIEEALAEIGDHNRPIVLSELKVFNDLDQDETEIFEIEWLRIEPSHRRNLAQ CCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHH AMQEVGEASLELDFRAVFSILLTDQDPAIRIAAVKGMAEDTRRSSLRRLSELLTTDPDDG HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCC VRANAAITLGAWALRAGEGNLDQRTSNELLQTLWAVFDDRQTSTLVRQRLLETLGYLADS CCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC DPRVNQEIGAAHQRLDDGWQAAALCAMGRTGLDQWLPTITASLRSHEPLLRFEAVRAAGE CCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LGDLAESIVNHVARATADGDVEVATTAIWALGQIGGAAARRFLEQLVNDSEGVRREAAAE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHH ALKELQFFDDPIQSLPLDDDEDEDEYWYGDDEDE HHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEEQNERDIEEALAEIGDHNRPIVLSELKVFNDLDQDETEIFEIEWLRIEPSHRRNLAQ CCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHH AMQEVGEASLELDFRAVFSILLTDQDPAIRIAAVKGMAEDTRRSSLRRLSELLTTDPDDG HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCC VRANAAITLGAWALRAGEGNLDQRTSNELLQTLWAVFDDRQTSTLVRQRLLETLGYLADS CCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC DPRVNQEIGAAHQRLDDGWQAAALCAMGRTGLDQWLPTITASLRSHEPLLRFEAVRAAGE CCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LGDLAESIVNHVARATADGDVEVATTAIWALGQIGGAAARRFLEQLVNDSEGVRREAAAE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHH ALKELQFFDDPIQSLPLDDDEDEDEYWYGDDEDE HHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA