| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159896605
Identifier: 159896605
GI number: 159896605
Start: 94265
End: 95170
Strand: Direct
Name: 159896605
Synonym: Haur_0072
Alternate gene names: NA
Gene position: 94265-95170 (Clockwise)
Preceding gene: 159896604
Following gene: 159896606
Centisome position: 1.49
GC content: 50.88
Gene sequence:
>906_bases ATGGATCGAATTTGGCGAATTACTGCTTGTTTGCTGCTCTTTGGTTGGTTGTTGGCCCAGCCATTAACGGCTATGGCCCA AGCCAGCGAGGTCAGCGTCAGCGAATATACCCAACTGCTACGCGAAGCCTTTACGGCAGCTCAACGTAACGATGAAATAG GCCTGCGCGAGGTCAGCGACAAAATCATTGCGCTTAAACAGCTACGAACTGCTGATAATCAAACGCTGGCAGTTAATCAT CAATGGCTCAAAGATAGCCTTGCGAGTAATACTCCCAATTTGCTGCTGATTCGTGAACGCTTGGCGGCTATGCTCGAAGC CCTGACTGCTGGCCGTGAAACCGGCCCCCAAGATCTCGAAACCTTGAAGGTTATTCTCAACAATCCACCGTTTGATGCGT TAAATCCCGAACGGAATCAATCAAGGCCAGATTTTGATTTTGGCTTTCTAAGCTGGTTGTTTAACGATGGTTTAACTGGC TGCTTTACGATTATTGCACTGGTCTTTGTTGTGGGCCTGCTCGGCTATATTGTCTCGACGGTGCGCCGCAATAGTGTGAG CGTGGCCCGCCGCAAAGCTCCCGCTGAGGAGCAAAAACTAACCAGTGTCCAAGCAATCGAACGTGCCGATAAAGTCGCCG CCGAAGAGGGCGATTTTCGCGATGCTGTGCGTTATTTGTACCTTTCAACCTTGTTATGGCTCGAAGAGCGTGGCCTCTTG CGCTATGATCGAACCTTGACCAACCGTGAGGTATTGGCGGCGGTTCCCAGTAACTCGCCCTTGCATCAACGCTTAGCTCC GGTTGTTCAAACCTTTGATCGGGTCTGGTATGGGATTGCCGAAGTCGATCAAGGCACGTTTGATCAATACCGCCAACAAG TGACAACCCTGCGCGAGGTACGCTAA
Upstream 100 bases:
>100_bases ACCTTGCTCTATTACGATCAATTGCGACTGGCCTATAGCGGCATTCCCACGAACCCAAGCATTACTGCTCAGCAGTAACT AGCCTACTTGAGAGGTTGAG
Downstream 100 bases:
>100_bases GATGAATAGTAAAGTGAAATTTTTCGCGATTTTCATTGGCATCGTCGCGTTGTCATTTTTCTTATTTCGCTCCTGCGATC CTCAAGCGCGTAACCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MDRIWRITACLLLFGWLLAQPLTAMAQASEVSVSEYTQLLREAFTAAQRNDEIGLREVSDKIIALKQLRTADNQTLAVNH QWLKDSLASNTPNLLLIRERLAAMLEALTAGRETGPQDLETLKVILNNPPFDALNPERNQSRPDFDFGFLSWLFNDGLTG CFTIIALVFVVGLLGYIVSTVRRNSVSVARRKAPAEEQKLTSVQAIERADKVAAEEGDFRDAVRYLYLSTLLWLEERGLL RYDRTLTNREVLAAVPSNSPLHQRLAPVVQTFDRVWYGIAEVDQGTFDQYRQQVTTLREVR
Sequences:
>Translated_301_residues MDRIWRITACLLLFGWLLAQPLTAMAQASEVSVSEYTQLLREAFTAAQRNDEIGLREVSDKIIALKQLRTADNQTLAVNH QWLKDSLASNTPNLLLIRERLAAMLEALTAGRETGPQDLETLKVILNNPPFDALNPERNQSRPDFDFGFLSWLFNDGLTG CFTIIALVFVVGLLGYIVSTVRRNSVSVARRKAPAEEQKLTSVQAIERADKVAAEEGDFRDAVRYLYLSTLLWLEERGLL RYDRTLTNREVLAAVPSNSPLHQRLAPVVQTFDRVWYGIAEVDQGTFDQYRQQVTTLREVR >Mature_301_residues MDRIWRITACLLLFGWLLAQPLTAMAQASEVSVSEYTQLLREAFTAAQRNDEIGLREVSDKIIALKQLRTADNQTLAVNH QWLKDSLASNTPNLLLIRERLAAMLEALTAGRETGPQDLETLKVILNNPPFDALNPERNQSRPDFDFGFLSWLFNDGLTG CFTIIALVFVVGLLGYIVSTVRRNSVSVARRKAPAEEQKLTSVQAIERADKVAAEEGDFRDAVRYLYLSTLLWLEERGLL RYDRTLTNREVLAAVPSNSPLHQRLAPVVQTFDRVWYGIAEVDQGTFDQYRQQVTTLREVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34108; Mature: 34108
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRIWRITACLLLFGWLLAQPLTAMAQASEVSVSEYTQLLREAFTAAQRNDEIGLREVSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH KIIALKQLRTADNQTLAVNHQWLKDSLASNTPNLLLIRERLAAMLEALTAGRETGPQDLE HHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHH TLKVILNNPPFDALNPERNQSRPDFDFGFLSWLFNDGLTGCFTIIALVFVVGLLGYIVST HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VRRNSVSVARRKAPAEEQKLTSVQAIERADKVAAEEGDFRDAVRYLYLSTLLWLEERGLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH RYDRTLTNREVLAAVPSNSPLHQRLAPVVQTFDRVWYGIAEVDQGTFDQYRQQVTTLREV HHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC R C >Mature Secondary Structure MDRIWRITACLLLFGWLLAQPLTAMAQASEVSVSEYTQLLREAFTAAQRNDEIGLREVSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH KIIALKQLRTADNQTLAVNHQWLKDSLASNTPNLLLIRERLAAMLEALTAGRETGPQDLE HHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHH TLKVILNNPPFDALNPERNQSRPDFDFGFLSWLFNDGLTGCFTIIALVFVVGLLGYIVST HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH VRRNSVSVARRKAPAEEQKLTSVQAIERADKVAAEEGDFRDAVRYLYLSTLLWLEERGLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH RYDRTLTNREVLAAVPSNSPLHQRLAPVVQTFDRVWYGIAEVDQGTFDQYRQQVTTLREV HHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA