| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is baeR [H]
Identifier: 159896603
GI number: 159896603
Start: 91117
End: 93225
Strand: Direct
Name: baeR [H]
Synonym: Haur_0070
Alternate gene names: 159896603
Gene position: 91117-93225 (Clockwise)
Preceding gene: 159896602
Following gene: 159896604
Centisome position: 1.44
GC content: 50.97
Gene sequence:
>2109_bases ATGACCGAAATGCACGAATTTAGTCAACAGCCGTTAGTCTTGATCGTCGATGATCAATCTTCAAATCGTTCAATTGTGCG GCGTTATGTTGAAGCGGCGGGTTATCTCGCCGCTGAGGCTGAGCATGGCGTGGCGGCGTTGGATTTTGTGCGTCAAACGC CGCCAGATGCGATCTTGCTCGATATTTTTATGCCTGGCATTGATGGAATTGAAGTGCTGAAGACGATTCGTGCCCAGCGC GATCATCATTATATTCCGATTATTGTGGTGACTGCCGCAGCAGAATTGGCGGTGCGCCAACAAGCTTATTTTGAGGGAGC CGATGATTTTCTGCTCAAGCCGGTCGATTCGGCGACGCTTCGCGCCCGTTTGCGGGCGGCAATTCGTTTGAAACATGTGC TTTCGCGGGTTGAGGCCGAGCGCGAACGTTTTGCCCTGATCGCCGATATTACCCGCGATATCACCCAGATTGAGTCGATT TCGGGCATGCTGGCACATGTGGTCGATGTGAGCACCAAAGCTTTACAGGCCGACCATGGCAATTTGTTTTTGTTGCATGA TGTAGCCGATGTTGAAATTCTCACAACCGACGATGGCGTTTCGCACAATCTTGATCGAGTAAAACGGGTGGTCAAAGAGG GTGCGGCAGGCTATGCCTTGCGCAGTCGCGAAACCGTGCGGATCACCGATGTCCATGAAGATGTGCGTTGGTTGCAGCTT GATCAATCGGCGGCCAGCGTGCGTTCAGCCTTGATTGTGCCAATTGGCGATGCCAGTGGGCCGTTGGGTGTTTTAGCGGT GTATCATAGCGTGGTTGACCATTTCAGCGCCGATGATCAAGCCTTGCTCGAATTGATTGCCCACCAAATTATTGGGCCAA TTCGCCAAGCCCAAATGCGCGAACAATTGGCGCGTCAAACCCGCCAGTTGCAATTGGTCAATAATCTAGCCCAATCGCTC AGCGCCAATTTGGATCTCGATTCGCTCTATCGCAGTATTGAGCAAGAGTTGCAACAAATTATGGGGCCAGTTGCAATTGC ATGGTATTCATATCGCAATGCAATTATTGATTTGGCCTATACCTCACAGCAACATGCCTTCTGTATGCCCAACGATCAGC AAAGCCTGCATTTGCTGACCGAACTTGGCACGATTACGCGGGTCTATTCGTGTGTTTTAGGCACTGATACCTTAGTGCCA ATTACCCAGCAATTGCTCGATGCAGGTTATCAAGGCTGTGCCGCAGTGCCATTGTTGCATCAAGCTCGCCTATTGGGTGT GTTGATTATTGCAATCAAGCATCGTCAAATTACCAATGAAGAAGTAGCCTTGCTTGAAATGGCCCGACCGCATTTTGCCG TAGCATTGGCCAATGCCCAAACTGTGGCCGACCAAGCAGCCCGCCAAACCGAGCAGGCCGAATTGGGCTATTTGCGCAAT ATGGCCCAACTAGCTGGCCAAATGGCTCATCACTTCAATAATTTATTGGCGGTGATTTTGGGCAATACCCAATTGGCCGA GCTTGATGCGATTGACGAAGGCCAGCGTGAATTATTGGCCGAGGTGGTCAAACATGTGCGTGGCGGCAAAGAGATGGTTC AGCGGATTCATCTGCTCAAAGGCGCTAGCCGGATTAGTCCTGCGCCATTTCCGATTGATCTCAGTGATGCCTTGCCCAGC CTAATCGATCAAGCCTTGCAAATTCATCGTTCGGTTGAGCACTTGCAGCTTGAAATTCAGCCGAATTTGCATATTTTATT GCAAGAGCGCGAATTGCTGACCCTCTGCACCGAACTGCTCAATAATGCCTTGGAATCTGGCTCAAGCCATGCGGGGATTG TGATCAAGGCTTATCAAACTGAGCATGCGACGGTTTTGGCGTTTCGTGATGCTGGACGTGGTATCCCAGTCGAAGCCTTG GGCGATATTTGGCAACCTTTCTGGACAACCCATGGTCCACAGCGTTTGGGCTTAGGCTTGCCAATTTGCGCTGCCGTGAT GTGGCGGGCATCTGGCTCGATCAGCTTAATTCCGAATGACCCTGAGCCAGGCATCACCGCGTTGTTGCAATTTCCCTTAT TGCCCAACGAAGCAGCAAATTCGGCCTAG
Upstream 100 bases:
>100_bases CGATTTGGCCGTGCCATTGGAAGTAAACGTTGAAACTGGGCTGAATTGGGATCAGCTTCAGCGCTGGCATGCCCCAGCCT AGTAATTTTAGGAACTCTGC
Downstream 100 bases:
>100_bases CTTAGCATAATTTTCCTCTATCAGAACCTTGAGGGCTGCGGTATAATAGATAGCGGCGGTGGCATTCACGCCGCTTCAAA GGTGTTTAAGTAGAGGGTTT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MTEMHEFSQQPLVLIVDDQSSNRSIVRRYVEAAGYLAAEAEHGVAALDFVRQTPPDAILLDIFMPGIDGIEVLKTIRAQR DHHYIPIIVVTAAAELAVRQQAYFEGADDFLLKPVDSATLRARLRAAIRLKHVLSRVEAERERFALIADITRDITQIESI SGMLAHVVDVSTKALQADHGNLFLLHDVADVEILTTDDGVSHNLDRVKRVVKEGAAGYALRSRETVRITDVHEDVRWLQL DQSAASVRSALIVPIGDASGPLGVLAVYHSVVDHFSADDQALLELIAHQIIGPIRQAQMREQLARQTRQLQLVNNLAQSL SANLDLDSLYRSIEQELQQIMGPVAIAWYSYRNAIIDLAYTSQQHAFCMPNDQQSLHLLTELGTITRVYSCVLGTDTLVP ITQQLLDAGYQGCAAVPLLHQARLLGVLIIAIKHRQITNEEVALLEMARPHFAVALANAQTVADQAARQTEQAELGYLRN MAQLAGQMAHHFNNLLAVILGNTQLAELDAIDEGQRELLAEVVKHVRGGKEMVQRIHLLKGASRISPAPFPIDLSDALPS LIDQALQIHRSVEHLQLEIQPNLHILLQERELLTLCTELLNNALESGSSHAGIVIKAYQTEHATVLAFRDAGRGIPVEAL GDIWQPFWTTHGPQRLGLGLPICAAVMWRASGSISLIPNDPEPGITALLQFPLLPNEAANSA
Sequences:
>Translated_702_residues MTEMHEFSQQPLVLIVDDQSSNRSIVRRYVEAAGYLAAEAEHGVAALDFVRQTPPDAILLDIFMPGIDGIEVLKTIRAQR DHHYIPIIVVTAAAELAVRQQAYFEGADDFLLKPVDSATLRARLRAAIRLKHVLSRVEAERERFALIADITRDITQIESI SGMLAHVVDVSTKALQADHGNLFLLHDVADVEILTTDDGVSHNLDRVKRVVKEGAAGYALRSRETVRITDVHEDVRWLQL DQSAASVRSALIVPIGDASGPLGVLAVYHSVVDHFSADDQALLELIAHQIIGPIRQAQMREQLARQTRQLQLVNNLAQSL SANLDLDSLYRSIEQELQQIMGPVAIAWYSYRNAIIDLAYTSQQHAFCMPNDQQSLHLLTELGTITRVYSCVLGTDTLVP ITQQLLDAGYQGCAAVPLLHQARLLGVLIIAIKHRQITNEEVALLEMARPHFAVALANAQTVADQAARQTEQAELGYLRN MAQLAGQMAHHFNNLLAVILGNTQLAELDAIDEGQRELLAEVVKHVRGGKEMVQRIHLLKGASRISPAPFPIDLSDALPS LIDQALQIHRSVEHLQLEIQPNLHILLQERELLTLCTELLNNALESGSSHAGIVIKAYQTEHATVLAFRDAGRGIPVEAL GDIWQPFWTTHGPQRLGLGLPICAAVMWRASGSISLIPNDPEPGITALLQFPLLPNEAANSA >Mature_701_residues TEMHEFSQQPLVLIVDDQSSNRSIVRRYVEAAGYLAAEAEHGVAALDFVRQTPPDAILLDIFMPGIDGIEVLKTIRAQRD HHYIPIIVVTAAAELAVRQQAYFEGADDFLLKPVDSATLRARLRAAIRLKHVLSRVEAERERFALIADITRDITQIESIS GMLAHVVDVSTKALQADHGNLFLLHDVADVEILTTDDGVSHNLDRVKRVVKEGAAGYALRSRETVRITDVHEDVRWLQLD QSAASVRSALIVPIGDASGPLGVLAVYHSVVDHFSADDQALLELIAHQIIGPIRQAQMREQLARQTRQLQLVNNLAQSLS ANLDLDSLYRSIEQELQQIMGPVAIAWYSYRNAIIDLAYTSQQHAFCMPNDQQSLHLLTELGTITRVYSCVLGTDTLVPI TQQLLDAGYQGCAAVPLLHQARLLGVLIIAIKHRQITNEEVALLEMARPHFAVALANAQTVADQAARQTEQAELGYLRNM AQLAGQMAHHFNNLLAVILGNTQLAELDAIDEGQRELLAEVVKHVRGGKEMVQRIHLLKGASRISPAPFPIDLSDALPSL IDQALQIHRSVEHLQLEIQPNLHILLQERELLTLCTELLNNALESGSSHAGIVIKAYQTEHATVLAFRDAGRGIPVEALG DIWQPFWTTHGPQRLGLGLPICAAVMWRASGSISLIPNDPEPGITALLQFPLLPNEAANSA
Specific function: Member of the two-component regulatory system BaeS/BaeR. Activates the mdtABCD operon [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=142, Percent_Identity=38.0281690140845, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=40.7407407407407, Blast_Score=80, Evalue=6e-16, Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787487, Length=140, Percent_Identity=35, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786911, Length=117, Percent_Identity=39.3162393162393, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788191, Length=112, Percent_Identity=38.3928571428571, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1790437, Length=120, Percent_Identity=35.8333333333333, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788550, Length=125, Percent_Identity=32, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI87082012, Length=123, Percent_Identity=30.8943089430894, Blast_Score=66, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 77232; Mature: 77100
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMHEFSQQPLVLIVDDQSSNRSIVRRYVEAAGYLAAEAEHGVAALDFVRQTPPDAILL CCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEE DIFMPGIDGIEVLKTIRAQRDHHYIPIIVVTAAAELAVRQQAYFEGADDFLLKPVDSATL EECCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHCCCCHHHCCCCCHHHH RARLRAAIRLKHVLSRVEAERERFALIADITRDITQIESISGMLAHVVDVSTKALQADHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLFLLHDVADVEILTTDDGVSHNLDRVKRVVKEGAAGYALRSRETVRITDVHEDVRWLQL CEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEECCCCEEEEEECHHHHHHHHH DQSAASVRSALIVPIGDASGPLGVLAVYHSVVDHFSADDQALLELIAHQIIGPIRQAQMR HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH EQLARQTRQLQLVNNLAQSLSANLDLDSLYRSIEQELQQIMGPVAIAWYSYRNAIIDLAY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE TSQQHAFCMPNDQQSLHLLTELGTITRVYSCVLGTDTLVPITQQLLDAGYQGCAAVPLLH ECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH QARLLGVLIIAIKHRQITNEEVALLEMARPHFAVALANAQTVADQAARQTEQAELGYLRN HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH MAQLAGQMAHHFNNLLAVILGNTQLAELDAIDEGQRELLAEVVKHVRGGKEMVQRIHLLK HHHHHHHHHHHHHHHHEEEECCCCEEHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH GASRISPAPFPIDLSDALPSLIDQALQIHRSVEHLQLEIQPNLHILLQERELLTLCTELL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEHHHHHHHHHHHH NNALESGSSHAGIVIKAYQTEHATVLAFRDAGRGIPVEALGDIWQPFWTTHGPQRLGLGL HHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHCCCCH PICAAVMWRASGSISLIPNDPEPGITALLQFPLLPNEAANSA HHHHHHHHHCCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TEMHEFSQQPLVLIVDDQSSNRSIVRRYVEAAGYLAAEAEHGVAALDFVRQTPPDAILL CCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEE DIFMPGIDGIEVLKTIRAQRDHHYIPIIVVTAAAELAVRQQAYFEGADDFLLKPVDSATL EECCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHCCCCHHHCCCCCHHHH RARLRAAIRLKHVLSRVEAERERFALIADITRDITQIESISGMLAHVVDVSTKALQADHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLFLLHDVADVEILTTDDGVSHNLDRVKRVVKEGAAGYALRSRETVRITDVHEDVRWLQL CEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEECCCCEEEEEECHHHHHHHHH DQSAASVRSALIVPIGDASGPLGVLAVYHSVVDHFSADDQALLELIAHQIIGPIRQAQMR HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH EQLARQTRQLQLVNNLAQSLSANLDLDSLYRSIEQELQQIMGPVAIAWYSYRNAIIDLAY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE TSQQHAFCMPNDQQSLHLLTELGTITRVYSCVLGTDTLVPITQQLLDAGYQGCAAVPLLH ECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH QARLLGVLIIAIKHRQITNEEVALLEMARPHFAVALANAQTVADQAARQTEQAELGYLRN HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH MAQLAGQMAHHFNNLLAVILGNTQLAELDAIDEGQRELLAEVVKHVRGGKEMVQRIHLLK HHHHHHHHHHHHHHHHEEEECCCCEEHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH GASRISPAPFPIDLSDALPSLIDQALQIHRSVEHLQLEIQPNLHILLQERELLTLCTELL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEHHHHHHHHHHHH NNALESGSSHAGIVIKAYQTEHATVLAFRDAGRGIPVEALGDIWQPFWTTHGPQRLGLGL HHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHCCCCH PICAAVMWRASGSISLIPNDPEPGITALLQFPLLPNEAANSA HHHHHHHHHCCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]