| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yegU [C]
Identifier: 159896590
GI number: 159896590
Start: 72641
End: 73558
Strand: Direct
Name: yegU [C]
Synonym: Haur_0057
Alternate gene names: 159896590
Gene position: 72641-73558 (Clockwise)
Preceding gene: 159896589
Following gene: 159896594
Centisome position: 1.14
GC content: 54.68
Gene sequence:
>918_bases ATGCTTGAGCGATATCGTGGTTGTTTGTTGGGGTTGGCGGTTGGCGATGCAGTTGGCACGACGGTAGAATTTAGTCCGCC AGGCTCATTTAAGCCGTTGACTGATCTGGTTGGTGGTGGACCTTTCAATTTGCCACGCGGCGCGTGGACTGACGATACCT CGATGGCCTTGTGCCTTGCCGCTAGCTTGATCGAGCGCCAAGGCTTCGATGCAGCGGATCAGATGCAGCGCTATTGTCGC TGGCGCGATTATGGTTATATGAGCAGCACTGGCTCGTGTTTTGATTGTGGGATTACAGTTGGCAATGCGCTCAGCACATT TCAACGCACGGGCAACCCCTACAGCGGCTCGACCGACCCTGCGACTGCTGGCAATGGCTCGTTGATGCGCTTGGCTCCCG TGGTTTTGGCCTACGCCAATCAGCCTGAGCAAGCGATGCAACTGGCGGTCGATAGTTCGCGCACAACCCATGGTGCAGTA GCAGCGGTTGATGCTTGTCGTTATTTCGCTGGCTTGCTGATTGGGGCATTGAATGGAGTCGATAAAGCGACCTTGCTAGC TCCGCGCTATAGCCCAATCGCCAATTATTGGCAGCAACAGCCGTTGCAAGCTGATATTGATGAGATTGCCGCTGGCTCGT TTTGGCAGCGCCAGCCACCTGAAATCCAGGGCACTGGCTATGTGGTGCGTTCGCTTGAAGCGGCGTTATGGGCGTTTGCC AAGAGCGATTCATTTCGTGAGGGCTGTTTGATGGCGGCCAATCTGGGCCACGATGCCGATACTACTGCCGCAATTTATGG CCAAATCGCCGGAGCCTACTATGGCGAAGCTGGAATTCCTAGCGAATGGCGTGAACCGATTGTCAGCCATGATTTGATCG TGGAATTTGCTGAGCGGTTGTACCGTTTACAAGGATGA
Upstream 100 bases:
>100_bases CTTGAATCTGGCATGAATGCTGCTAAGATTGCAACCGAGAACTGATAGACAAGACCCATTGCAGCACTACAATTGATCCA TCAACGTTGATGAGGTGGCT
Downstream 100 bases:
>100_bases AGGATGAGGGATGAGGGATGAACGTTCATCCTGTATTGCTCAAAGCTGAATGATTAAACGAAGTGGCGGCTCAATGTTTC GATTGAGCCGCCACTTTAGT
Product: ADP-ribosylation/crystallin J1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MLERYRGCLLGLAVGDAVGTTVEFSPPGSFKPLTDLVGGGPFNLPRGAWTDDTSMALCLAASLIERQGFDAADQMQRYCR WRDYGYMSSTGSCFDCGITVGNALSTFQRTGNPYSGSTDPATAGNGSLMRLAPVVLAYANQPEQAMQLAVDSSRTTHGAV AAVDACRYFAGLLIGALNGVDKATLLAPRYSPIANYWQQQPLQADIDEIAAGSFWQRQPPEIQGTGYVVRSLEAALWAFA KSDSFREGCLMAANLGHDADTTAAIYGQIAGAYYGEAGIPSEWREPIVSHDLIVEFAERLYRLQG
Sequences:
>Translated_305_residues MLERYRGCLLGLAVGDAVGTTVEFSPPGSFKPLTDLVGGGPFNLPRGAWTDDTSMALCLAASLIERQGFDAADQMQRYCR WRDYGYMSSTGSCFDCGITVGNALSTFQRTGNPYSGSTDPATAGNGSLMRLAPVVLAYANQPEQAMQLAVDSSRTTHGAV AAVDACRYFAGLLIGALNGVDKATLLAPRYSPIANYWQQQPLQADIDEIAAGSFWQRQPPEIQGTGYVVRSLEAALWAFA KSDSFREGCLMAANLGHDADTTAAIYGQIAGAYYGEAGIPSEWREPIVSHDLIVEFAERLYRLQG >Mature_305_residues MLERYRGCLLGLAVGDAVGTTVEFSPPGSFKPLTDLVGGGPFNLPRGAWTDDTSMALCLAASLIERQGFDAADQMQRYCR WRDYGYMSSTGSCFDCGITVGNALSTFQRTGNPYSGSTDPATAGNGSLMRLAPVVLAYANQPEQAMQLAVDSSRTTHGAV AAVDACRYFAGLLIGALNGVDKATLLAPRYSPIANYWQQQPLQADIDEIAAGSFWQRQPPEIQGTGYVVRSLEAALWAFA KSDSFREGCLMAANLGHDADTTAAIYGQIAGAYYGEAGIPSEWREPIVSHDLIVEFAERLYRLQG
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: NA
Molecular weight: Translated: 32767; Mature: 32767
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERYRGCLLGLAVGDAVGTTVEFSPPGSFKPLTDLVGGGPFNLPRGAWTDDTSMALCLA CCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ASLIERQGFDAADQMQRYCRWRDYGYMSSTGSCFDCGITVGNALSTFQRTGNPYSGSTDP HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCC ATAGNGSLMRLAPVVLAYANQPEQAMQLAVDSSRTTHGAVAAVDACRYFAGLLIGALNGV CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DKATLLAPRYSPIANYWQQQPLQADIDEIAAGSFWQRQPPEIQGTGYVVRSLEAALWAFA CHHHEECCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH KSDSFREGCLMAANLGHDADTTAAIYGQIAGAYYGEAGIPSEWREPIVSHDLIVEFAERL CCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH YRLQG HHCCC >Mature Secondary Structure MLERYRGCLLGLAVGDAVGTTVEFSPPGSFKPLTDLVGGGPFNLPRGAWTDDTSMALCLA CCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ASLIERQGFDAADQMQRYCRWRDYGYMSSTGSCFDCGITVGNALSTFQRTGNPYSGSTDP HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCC ATAGNGSLMRLAPVVLAYANQPEQAMQLAVDSSRTTHGAVAAVDACRYFAGLLIGALNGV CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DKATLLAPRYSPIANYWQQQPLQADIDEIAAGSFWQRQPPEIQGTGYVVRSLEAALWAFA CHHHEECCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH KSDSFREGCLMAANLGHDADTTAAIYGQIAGAYYGEAGIPSEWREPIVSHDLIVEFAERL CCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH YRLQG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]