| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is bcsA [H]
Identifier: 159896554
GI number: 159896554
Start: 24708
End: 25772
Strand: Reverse
Name: bcsA [H]
Synonym: Haur_0021
Alternate gene names: 159896554
Gene position: 25772-24708 (Counterclockwise)
Preceding gene: 159896561
Following gene: 159896553
Centisome position: 0.41
GC content: 52.86
Gene sequence:
>1065_bases ATGCCACGAATCCAAGCAATTGGGCTAGGTGTGCCCCAGTATTGCGTACCACAGCGGGCGGTGCAAGAGTTGGTGGCCCA GCGCTTTGCTCCAGCGTTTCCCGAAATTCAGCGCTATCTGACGATTTTTCGCCATGCCCAAATCGATACACGCTACTTGG TACGGCCCTTGGAGTGGTGGCATGAACCGCGCAGTTTTGCTGAATGCAATGCTATTTTTATCGAAGAAGCCCTCAACTTG AGTTGCCAAGCGATTGAGGCCTGTTTACAACCACTTGATCTCACGCCCAACGATATTGATCATTTGGTGGTGGTGACCAC AACTGGTTTGGCCGCGCCCAGCCTTGATGCGCGTTTGATGCAGCGGCTTGGCATGCAACCTCAAACGCGCCGCACGCCAA TTTGGGGCTTGGGCTGCGCTGGCGGTTTGGGCGGTCTCAACACGGCCTTCGATTATCTCCGCGCTGAGCCAAATCAGCGG GTCTTGTTAATAAATGTTGAATTTTGCTCGCTGACCTATCTCGCCGATGATTTTTCCAAACGCAACTTGATTGCCACTTC ACTGTTTGGGGATGGAGTGACCGCCGTGCTGCTCGAAGGCGATCAGGTGGCTCCGCGTGGGTCGGGCTTGGGCCAGATTG TTGGCACACTGAGTCATCTTTATCCCGACAGCGCTGAAATTATGGGCTGGAATGTGGTTAATTCAGGGTTTGAGGTCGTA TTCTCTTCGCGGATTCCCTCGATTGTGCGCGAAGAATTTCGCCCTTTGTTGGAACAATTTTTGGCCCAACATGGCCTGAG TCAAGCCGATCTTGGGCGCTATTTATTGCATCCTGGTGGGGCAAAAGTCGTGCAAGCCTACCAAGAATCGTTGCATCTCG CCGATGCCGATTTGGCGGTTTCGCGAGCAGTCTTGCGCGAATATGGCAACATGTCGTCGGCTACCATTTTCTTTGTAATG CAGCAAGCCTTAGCCGCCCAACCTCTAGCCAAGGATGAATATGGCTTATTGGCGGTGTTCGGGCCTGGTTTTAGTGCCGA ATTGGGATTAATTCGCGGCGAATAA
Upstream 100 bases:
>100_bases TGTTCTATGCTCTACGCTCTATGTTCTGATTCAGCCCATGCTATAGTTAAACCGCCAACTGCTTCAGCGGGTAAGCAGCC TCTAGTAGATAGGAACGATG
Downstream 100 bases:
>100_bases GGAGATTTATTATGTCAAACAATCTATCGTATGAAACGGTCTTTCATGAGTTGGAACAAACGGTTCATGCGCTCGAAGCA GGCGATTTACCATTGGAACA
Product: 3-oxoacyl-(ACP) synthase III
Products: NA
Alternate protein names: Naringenin-chalcone synthase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPRIQAIGLGVPQYCVPQRAVQELVAQRFAPAFPEIQRYLTIFRHAQIDTRYLVRPLEWWHEPRSFAECNAIFIEEALNL SCQAIEACLQPLDLTPNDIDHLVVVTTTGLAAPSLDARLMQRLGMQPQTRRTPIWGLGCAGGLGGLNTAFDYLRAEPNQR VLLINVEFCSLTYLADDFSKRNLIATSLFGDGVTAVLLEGDQVAPRGSGLGQIVGTLSHLYPDSAEIMGWNVVNSGFEVV FSSRIPSIVREEFRPLLEQFLAQHGLSQADLGRYLLHPGGAKVVQAYQESLHLADADLAVSRAVLREYGNMSSATIFFVM QQALAAQPLAKDEYGLLAVFGPGFSAELGLIRGE
Sequences:
>Translated_354_residues MPRIQAIGLGVPQYCVPQRAVQELVAQRFAPAFPEIQRYLTIFRHAQIDTRYLVRPLEWWHEPRSFAECNAIFIEEALNL SCQAIEACLQPLDLTPNDIDHLVVVTTTGLAAPSLDARLMQRLGMQPQTRRTPIWGLGCAGGLGGLNTAFDYLRAEPNQR VLLINVEFCSLTYLADDFSKRNLIATSLFGDGVTAVLLEGDQVAPRGSGLGQIVGTLSHLYPDSAEIMGWNVVNSGFEVV FSSRIPSIVREEFRPLLEQFLAQHGLSQADLGRYLLHPGGAKVVQAYQESLHLADADLAVSRAVLREYGNMSSATIFFVM QQALAAQPLAKDEYGLLAVFGPGFSAELGLIRGE >Mature_353_residues PRIQAIGLGVPQYCVPQRAVQELVAQRFAPAFPEIQRYLTIFRHAQIDTRYLVRPLEWWHEPRSFAECNAIFIEEALNLS CQAIEACLQPLDLTPNDIDHLVVVTTTGLAAPSLDARLMQRLGMQPQTRRTPIWGLGCAGGLGGLNTAFDYLRAEPNQRV LLINVEFCSLTYLADDFSKRNLIATSLFGDGVTAVLLEGDQVAPRGSGLGQIVGTLSHLYPDSAEIMGWNVVNSGFEVVF SSRIPSIVREEFRPLLEQFLAQHGLSQADLGRYLLHPGGAKVVQAYQESLHLADADLAVSRAVLREYGNMSSATIFFVMQ QALAAQPLAKDEYGLLAVFGPGFSAELGLIRGE
Specific function: Catalyzes The Condensation Reaction Of Fatty Acid Synthesis By The Addition To An Acyl Acceptor Of Two Carbons From Malonyl-Acp. Catalyzes The First Condensation Reaction Which Initiates Fatty Acid Synthesis And May Therefore Play A Role In Governing The
COG id: COG3424
COG function: function code Q; Predicted naringenin-chalcone synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chalcone/stilbene synthases family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012328 - InterPro: IPR018088 - InterPro: IPR001099 - InterPro: IPR011141 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF02797 Chal_sti_synt_C; PF00195 Chal_sti_synt_N [H]
EC number: =2.3.1.74 [H]
Molecular weight: Translated: 38896; Mature: 38765
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIQAIGLGVPQYCVPQRAVQELVAQRFAPAFPEIQRYLTIFRHAQIDTRYLVRPLEWW CCCCEEECCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH HEPRSFAECNAIFIEEALNLSCQAIEACLQPLDLTPNDIDHLVVVTTTGLAAPSLDARLM CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH QRLGMQPQTRRTPIWGLGCAGGLGGLNTAFDYLRAEPNQRVLLINVEFCSLTYLADDFSK HHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHEEHHHHHCCCC RNLIATSLFGDGVTAVLLEGDQVAPRGSGLGQIVGTLSHLYPDSAEIMGWNVVNSGFEVV CCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHH FSSRIPSIVREEFRPLLEQFLAQHGLSQADLGRYLLHPGGAKVVQAYQESLHLADADLAV HHHCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHCCHHHHH SRAVLREYGNMSSATIFFVMQQALAAQPLAKDEYGLLAVFGPGFSAELGLIRGE HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEECC >Mature Secondary Structure PRIQAIGLGVPQYCVPQRAVQELVAQRFAPAFPEIQRYLTIFRHAQIDTRYLVRPLEWW CCCEEECCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH HEPRSFAECNAIFIEEALNLSCQAIEACLQPLDLTPNDIDHLVVVTTTGLAAPSLDARLM CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH QRLGMQPQTRRTPIWGLGCAGGLGGLNTAFDYLRAEPNQRVLLINVEFCSLTYLADDFSK HHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEHHEEHHHHHCCCC RNLIATSLFGDGVTAVLLEGDQVAPRGSGLGQIVGTLSHLYPDSAEIMGWNVVNSGFEVV CCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHH FSSRIPSIVREEFRPLLEQFLAQHGLSQADLGRYLLHPGGAKVVQAYQESLHLADADLAV HHHCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHCCHHHHH SRAVLREYGNMSSATIFFVMQQALAAQPLAKDEYGLLAVFGPGFSAELGLIRGE HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]