| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159896539
Identifier: 159896539
GI number: 159896539
Start: 7580
End: 8269
Strand: Direct
Name: 159896539
Synonym: Haur_0006
Alternate gene names: NA
Gene position: 7580-8269 (Clockwise)
Preceding gene: 159896538
Following gene: 159896546
Centisome position: 0.12
GC content: 49.28
Gene sequence:
>690_bases GTGGGTCTAGTCTTCAATGTATTGTTGCTGGGTATCCCGCTGGGCTTAACTGTTTTGGGCGCGAGCCGTGGAATTCAGCG CGAGGCCATGACATTAATTGGCATTTTGTTGGGAGCCTTGTTGGCCGAATTGTGGGGGCCAATTTGGGGGCCGAATAATG CAACCCGCTTTAATCAAGATATTGCCAATACTACCGCTTGGATTTCGATTATTCTCTTGCTGGTTTGTACGATTTTCATT GGCTATGGCGGAGCATTGCTGCTGCCTTCGCGCAAGCAACTGGCCCAAGGCCGCTCACGCTGGTTTGGTGCTGGTGCTGG CTTGTTCAATGGGGTCTTGCTGCTCAGCCTGATTTTGCGCTATGGCAATGTTTACAACAATGACCTTCGGATTAGTGACT GGGTTGCGAGTAGCCGTGTAGCCATGCTGTTTATTGAGCGCTTCCCAACGATGTTGCTGATTGGGATTGTGACGATTGCC TTGCTGGTAAATCTGCGTTTATTGCAGCGCTTAATCTATAAAATTCATGGTAAGGATACTAAACCAGAAGAAAAGAAGAA GGCCGAGGAAAAACCTGCTGCCCCACCCCCACCACCAGAGCCAAAGCCCCCAGCTCCCGATACGGTCAACAACCCGATTT TGCGCGATTTGATTTTGGCTGAGATTAAAAAAGATAAACCACCAGCCTAA
Upstream 100 bases:
>100_bases TCTTTCGAGTTTCGAAAGGTCGCTTGTTAGTTGTGCGGATCAAGCAAGGGCTGTGCTATCATAGCTCGTAGCAAAACCAT CAGCACAAAGGAAGGTTGTT
Downstream 100 bases:
>100_bases AAAGACAACAATGGCCGAAGTAACTTCGGCCATTATTGGTTAACCTGAAAGTTAGTAGTTGTTCATAGCGGCTGGCAAGA AGACCTGTTGGGTGTAGAGG
Product: colicin V production protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MGLVFNVLLLGIPLGLTVLGASRGIQREAMTLIGILLGALLAELWGPIWGPNNATRFNQDIANTTAWISIILLLVCTIFI GYGGALLLPSRKQLAQGRSRWFGAGAGLFNGVLLLSLILRYGNVYNNDLRISDWVASSRVAMLFIERFPTMLLIGIVTIA LLVNLRLLQRLIYKIHGKDTKPEEKKKAEEKPAAPPPPPEPKPPAPDTVNNPILRDLILAEIKKDKPPA
Sequences:
>Translated_229_residues MGLVFNVLLLGIPLGLTVLGASRGIQREAMTLIGILLGALLAELWGPIWGPNNATRFNQDIANTTAWISIILLLVCTIFI GYGGALLLPSRKQLAQGRSRWFGAGAGLFNGVLLLSLILRYGNVYNNDLRISDWVASSRVAMLFIERFPTMLLIGIVTIA LLVNLRLLQRLIYKIHGKDTKPEEKKKAEEKPAAPPPPPEPKPPAPDTVNNPILRDLILAEIKKDKPPA >Mature_228_residues GLVFNVLLLGIPLGLTVLGASRGIQREAMTLIGILLGALLAELWGPIWGPNNATRFNQDIANTTAWISIILLLVCTIFIG YGGALLLPSRKQLAQGRSRWFGAGAGLFNGVLLLSLILRYGNVYNNDLRISDWVASSRVAMLFIERFPTMLLIGIVTIAL LVNLRLLQRLIYKIHGKDTKPEEKKKAEEKPAAPPPPPEPKPPAPDTVNNPILRDLILAEIKKDKPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25052; Mature: 24921
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLVFNVLLLGIPLGLTVLGASRGIQREAMTLIGILLGALLAELWGPIWGPNNATRFNQD CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IANTTAWISIILLLVCTIFIGYGGALLLPSRKQLAQGRSRWFGAGAGLFNGVLLLSLILR HHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YGNVYNNDLRISDWVASSRVAMLFIERFPTMLLIGIVTIALLVNLRLLQRLIYKIHGKDT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KPEEKKKAEEKPAAPPPPPEPKPPAPDTVNNPILRDLILAEIKKDKPPA CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GLVFNVLLLGIPLGLTVLGASRGIQREAMTLIGILLGALLAELWGPIWGPNNATRFNQD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IANTTAWISIILLLVCTIFIGYGGALLLPSRKQLAQGRSRWFGAGAGLFNGVLLLSLILR HHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH YGNVYNNDLRISDWVASSRVAMLFIERFPTMLLIGIVTIALLVNLRLLQRLIYKIHGKDT HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KPEEKKKAEEKPAAPPPPPEPKPPAPDTVNNPILRDLILAEIKKDKPPA CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA