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The map label for this gene is rpoC

Identifier: 15965102

GI number:

Start: 1468640

End: 1472845

Strand: Direct

Name: rpoC

Synonym: SMc01316

Alternate gene names: NA

Gene position: NA

Preceding gene: 15965101

Following gene: 15965104

Centisome position: NA

GC content: NA

Gene sequence:

>4206_bases
ATGAACCAAGAGGTCATGAATCTTTTCAATCCGCAGGTGCCTGCACAGACCTTCGATTCCATCCGGATTTCGATAGCGTC
CCCGGAGAAGATTCTTTCCTGGTCTTACGGTGAGATCAAGAAGCCGGAGACGATTAACTACCGTACCTTCAAGCCGGAAC
GCGACGGTCTTTTCTGCGCCCGCATCTTTGGTCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAG
TACAAGGGCATCATCTGCGAAAAGTGCGGCGTCGAAGTCACGCTGTCGCGCGTTCGCCGCGAGCGCATGGGCCATATCGA
GCTCGCCGCGCCCGTTGCTCACATCTGGTTCCTGAAGTCGCTGCCGAGCCGCATCGCAACGCTGCTCGACATGACGCTCA
AGGATATCGAGCGCGTCCTCTACTTCGAGAACTACATCGTCACCGAGCCGGGTCTGACGTCGCTCAAGGAAAACCAGCTC
CTGAGCGAAGAAGAATACATGATCGCGGTCGACGAGTTCGGTGAGGACCAGTTCACCGCGATGATCGGCGCCGAAGCGAT
CTACGAGATGCTCGCATCGATGAATCTCGAGAAGATCGCGGGCGACCTGCGTTCGGAGATGGCCGAGACGACGTCCGATC
TGAAGCAGAAGAAGCTGATGAAGCGGCTGAAGATCGTCGAGAACTTCATGGAATCCGGCAATCGTCCGGAATGGATGATC
ATGAAGGTCGTTCCGGTGATCCCGCCGGACCTGCGTCCGCTCGTGCCGCTTGACGGCGGCCGTTTCGCAACGTCGGACCT
CAACGATCTCTACCGCCGCGTCATCAACCGCAACAACCGCCTGAAGCGGCTGATCGAACTGCGTGCGCCGGGCATCATCA
TCCGCAACGAAAAGCGGATGCTGCAGGAATCCGTGGACGCGCTGTTCGACAACGGCCGCCGCGGCCGCGTCATCACGGGT
GCGAACAAGCGTCCGCTGAAGTCGCTCTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAA
GCGCGTCGACTATTCCGGCCGTTCGGTCATCGTGACCGGTCCGGAACTCAAGCTGCACCAGTGCGGCCTGCCGAAGAAGA
TGGCGCTCGAGCTCTTCAAGCCGTTCATCTACGCCCGCCTCGACGCCAAGGGTTACTCCTCGACCGTCAAGCAGGCGAAG
AAGCTGGTCGAGAAGGAAAAGCCGGAAGTCTGGGATATCCTGGACGAGGTCATCCGCGAGCACCCGGTTCTTCTGAACCG
CGCGCCGACCCTGCACCGCCTGGGCATCCAGGCCTTCGAGCCGATCCTGGTCGAAGGCAAGGCGATCCAGCTGCACCCGC
TCGTTTGCACGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTTCACGTGCCGCTGTCGCTCGAAGCGCAGCTC
GAAGCACGCGTGCTGATGATGTCGACGAACAACATCCTGCATCCGGCAAACGGTGCCCCGATCATCGTGCCGTCGCAGGA
CATGGTTCTCGGCCTGTACTATCTCTCGATCATGAACCAGAACGAGCCGGGCGAAGGCATGGCCTTCTCCGACATGGGCG
AATTGCACCATGCGCTGGAGACCAAGGCCGTCACCCTGCACGCCAAGATCCGTGGCCGTTACAAGACCGTCGATGCCGAG
GGCAACCCGGTTTCGAAGATCTATGAAACGACGCCTGGCCGCATGATCATCGGCGAACTCCTGCCGAAGAACCCGAACGT
CCCCTTCGAAACCTGCAACCAGGAAATGACCAAGAAGAACATCTCCAAGATGATCGACACGGTCTATCGCCATTGCGGTC
AGAAGGACACGGTCATCTTCTGCGACCGGATCATGCAGCTCGGCTTCTCGCATGCCTGCCGCGCCGGCATTTCGTTCGGC
AAGGACGACATGGTGATTCCGGACACGAAGGTGAAGATCGTCGGCGACACCGAAGCGCTCGTGAAGGAATACGAGCAGCA
GTACAATGACGGCCTCATCACCCAGGGCGAAAAGTACAACAAGGTCGTCGACGCCTGGGGCAAGGCGACCGAGAAGGTCG
CCGAAGAGATGATGGCGCGCATCAAGGCCGTCGAGTTCGACGACAGCGGCCGCCAGAAGCCGATGAACTCGATCTACATG
ATGTCGCACTCGGGCGCCCGCGGTTCGCCGAACCAGATGCGTCAGCTTGGCGGCATGCGCGGCCTCATGGCAAAGCCTTC
GGGCGAGATCATCGAAACGCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTGAACGAGTACTTCAACTCGACGCACG
GTGCCCGTAAGGGTCTCGCCGACACCGCCTTGAAGACTGCGAACTCCGGTTACCTGACCCGTCGTCTCGTCGATGTGGCG
CAGGACTGCATCGTCACGCATACGGATTGCGGCACCGACAAGGGCCTCACCATGACTGCGATCGTCGATGCCGGTCAGGT
CGTGGCCTCGATCGGCCAGCGTATCCTCGGCCGTACGGCGCTCGACAACATCGACAACCCGGTCACCGGTGAGCGCATCG
TCGATGCCGGCAAGATGATTCTCGAGCCGGACGTCGTCGCGATCGAGAAGGCCGGTATCCAGTCCGTCCGGATTCGCTCG
GCTCTGACCTGCGAGATCCAGACCGGCGTCTGCGGCGTTTGCTACGGCCGTGACCTCGCACGCGGTACGCCTGTCAACAT
GGGCGAAGCCGTCGGCGTCATCGCGGCTCAGTCGATCGGCGAGCCGGGCACGCAGCTGACCATGCGTACGTTCCACCTTG
GTGGTACGGCAACGGTGGTCGACCAGTCGTTCCTGGAAGCCTCTTATGAGGGCACGGTTCAGATCAAGAACCGCAACATG
CTGCGCAATTCCGATGGCGTACTCGTCGCCATGGGCCGCAACATGGCGATCCAGATCCTCGACGAACGCGGTGTCGAGCG
CTCCTCGCAGCGCGTTGCCTACGGTTCGAAGATCTTCGTCGACGATGGCGACAAGGTGAAGCGCGGCCAGCGTTTCGCCG
AGTGGGACCCCTACACCCGTCCGATGATGACGGAAGTGGAAGGTACCGTTCACTTCGAAGACGTGGTCGACGGCATCTCG
GTTCTGGAATCGACCGACGAGTCGACCGGCATCACCAAGCGCCAGGTCATCGACTGGCGTTCGACGCCACGCGGTACCGA
CCTGAAGCCGGCGATCGTCATCAAGGACAAGAACGGCAACATCGCCAAGCTTGCCCGCGGCGGCGAAGCCCGCTTCATGC
TCTCGGTCGACGCGATCCTTTCCGTCGAGCCGGGACAGAAGGTCAGCCAGGGCGACGTTCTTGCCCGTTCGCCGCTCGAA
AGCGCCAAGACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCCGAACTGTTCGAGGCGCGTCGTCCGAAGGATCACGC
CATCATCGCTGAGATCGATGGCACGATCCGTTTCGGCCGCGATTACAAGAACAAGCGTCGCGTGATGATCGAGCCGGCGG
AAGACGGTGTCGAGCCGGTCGAATACCTGATCCCGAAGGGCAAGCCCTTCCATCTTCAGGATGGCGACTACATCGAGAAG
GGCGACTACATCCTCGACGGCAATCCGGCGCCGCATGACATCCTGGCGATCAAGGGCGTGGAAGCACTTGCTTCCTATCT
CGTGAACGAGATCCAGGAAGTCTACCGACTGCAGGGCGTTGTCATCAACGACAAGCACATCGAGGTGATCGTCCGGCAGA
TGCTCCAGAAGGTCGAAATCACCGACGCCGGTGACTCGACCTATATCGTCGGCGACAACGTCGATCGCATCGAGCTCGAG
GACGTCAACGACTCTCTGCTTGCCGAAGGCAAGAAGCCCGCCTTTGGCGAGCCGGTGCTGCTCGGCATCACCAAGGCATC
GCTGCAGACCCCGTCCTTCATCTCGGCCGCTTCGTTCCAGGAGACCACCAAGGTCCTCACCGAAGCTGCGGTCGCAGGCA
AGACGGACAATCTGCAGGGCCTGAAGGAGAACGTCATTGTCGGTCGTCTCATCCCGGCCGGTACGGGCGGCACGATGACA
CAGATCCGCCGCATCGCTACGGCCCGCGACGAGTTGATCCTTGAAGAGCGACGCAAGGGCACCGGTGCGGAAAGCGCCAC
GCCGATGCTCGCCGACATGGCGAACGATCCCGCCGCGGCGGAATAA

Upstream 100 bases:

>100_bases
CCGATGCGGTTTTAGCTGTTTATGGGGCAGGGGCCGGCGCCCGGGATTTGCCGGCACCCTCGCCAAGCTCAGGGCTTAAA
TGCCCGCAAAGGAGACAGGC

Downstream 100 bases:

>100_bases
GCGGAAAGGGGAGGGTATCTGCCCTCCCTGGTGAAACAGTAAAGCCGCCTGCAGCGATCCGGGCGGCTTTTTCAGGTCGA
TGTGTTTGGCGTCGATGCGC

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1401_residues
MNQEVMNLFNPQVPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMK
YKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIATLLDMTLKDIERVLYFENYIVTEPGLTSLKENQL
LSEEEYMIAVDEFGEDQFTAMIGAEAIYEMLASMNLEKIAGDLRSEMAETTSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRMLQESVDALFDNGRRGRVITG
ANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK
KLVEKEKPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIMNQNEPGEGMAFSDMGELHHALETKAVTLHAKIRGRYKTVDAE
GNPVSKIYETTPGRMIIGELLPKNPNVPFETCNQEMTKKNISKMIDTVYRHCGQKDTVIFCDRIMQLGFSHACRAGISFG
KDDMVIPDTKVKIVGDTEALVKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDDSGRQKPMNSIYM
MSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGLADTALKTANSGYLTRRLVDVA
QDCIVTHTDCGTDKGLTMTAIVDAGQVVASIGQRILGRTALDNIDNPVTGERIVDAGKMILEPDVVAIEKAGIQSVRIRS
ALTCEIQTGVCGVCYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRNM
LRNSDGVLVAMGRNMAIQILDERGVERSSQRVAYGSKIFVDDGDKVKRGQRFAEWDPYTRPMMTEVEGTVHFEDVVDGIS
VLESTDESTGITKRQVIDWRSTPRGTDLKPAIVIKDKNGNIAKLARGGEARFMLSVDAILSVEPGQKVSQGDVLARSPLE
SAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGTIRFGRDYKNKRRVMIEPAEDGVEPVEYLIPKGKPFHLQDGDYIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVEITDAGDSTYIVGDNVDRIELE
DVNDSLLAEGKKPAFGEPVLLGITKASLQTPSFISAASFQETTKVLTEAAVAGKTDNLQGLKENVIVGRLIPAGTGGTMT
QIRRIATARDELILEERRKGTGAESATPMLADMANDPAAAE

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA