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The map label for this gene is 15928132

Identifier: 15928132

GI number: 15928132

Start: 2628455

End: 2629003

Strand: Direct

Name: 15928132

Synonym: SA2340

Alternate gene names: NA

Gene position: 2628455-2629003 (Clockwise)

Preceding gene: 15928127

Following gene: 15928135

Centisome position: 93.38

GC content: 30.6

Gene sequence:

>549_bases
ATGAAAGAGACTGATTTACGAGTTATAAAGACAAAAAAAGCATTGTCGAGTAGCTTGCTACAATTGTTAGAACAGCAATT
ATTCCAAACGATTACTGTCAATCAAATTTGCGACAATGCACTCGTACACCGCACAACATTTTATAAACATTTTTATGATA
AATATGATCTTCTAGAGTATTTGTTCAATCAATTGACTAAAGACTACTTTGCTAGAGATATCAGTGACCGTCTTAATCAT
CCATTCCAAACGATGAGTGATACGATTAATAATAAAGAGGATTTGAGAGAAATCGCAGAATTCCAAGAAGAAGACGCTGA
ATTTAATAAAGTATTAAAAAATGTCTGCATTAAAATTATGCATAACGATATCAAAAATAATAGAGACCGTATCGATATTG
ACAGCGACATCCCAGATAATCTCATATTTTATATTTATGACTCGTTGATTGAAGGTTTTATACATTGGATAAAAGATGAA
AAAATTGACTGGCCTGGCGAAGATATTGATAACATTTTCCATAGATTAATCAATATTAAGATTAAATAG

Upstream 100 bases:

>100_bases
CAGTGTAGATTATTGTTCGATTATAGTATCTATCCCCGACCTCTTAAAGAATCAATTGGAAAATTTTGTATATTAAACTA
CACACAAAGGAGAAATGTAG

Downstream 100 bases:

>100_bases
TAGATGAGAAACTCATGAGCGTTACCAACATTCATAATAAAAACGATAGTGTACACGTTAATGAATTCGTGTACTACTAT
CGTTTTTTATTTTTATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Regulatory Protein; Transcriptional Regulator TetR-Family; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNH
PFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDE
KIDWPGEDIDNIFHRLINIKIK

Sequences:

>Translated_182_residues
MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNH
PFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDE
KIDWPGEDIDNIFHRLINIKIK
>Mature_182_residues
MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEYLFNQLTKDYFARDISDRLNH
PFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIMHNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDE
KIDWPGEDIDNIFHRLINIKIK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21879; Mature: 21879

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
IK
CC
>Mature Secondary Structure
MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
IK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA