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The map label for this gene is ydeD [H]

Identifier: 15928113

GI number: 15928113

Start: 2606268

End: 2607194

Strand: Direct

Name: ydeD [H]

Synonym: SA2322

Alternate gene names: 15928113

Gene position: 2606268-2607194 (Clockwise)

Preceding gene: 15928112

Following gene: 15928122

Centisome position: 92.59

GC content: 34.84

Gene sequence:

>927_bases
TTGGCGAATAATCATTCAGCTTTGCGTTTAAAAGGAATTATACTTGCCATTGTCGGTGCTTGTTTATGGGGATTAGGTGG
TACTGTTTCTGATTTCTTGTTCAAATATAAGAATATTAATGTCGATTGGTACGTCACTGCTCGACTTGTAGTCAGTGGTG
TTTTCTTACTTATTATGTACAAAATGATGCAACCCAAACGTTCAATATTTAGCGTATTCCAAGATCGACGTATGTTAGGC
AAATTACTTATCTTCAGTATACTGGGCATGTTAGTTGTACAATATGCTTATATGGCATCTATTAATACAGGTAATGCTGC
GATTGCAACATTACTACAATACATTGCGCCAGTTTATATTATTATTTGGTTTGTCATAAGAGGCGTTGCAAAACTAACAT
TATTTGATGTGCTTGCTATTATCATGACACTATTAGGAACATTTTTATTATTAACGAATGGTTCATTTTCTAATTTAGTC
GTCAATCCTGCAAGTTTATTCTGGGGTATTTTAGCTGGTGTAGCACTCGCTTTTTACACAATTTATCCTTCAGACCTACT
TAACCGCTTCGGTTCGATTCTAATTGTCGGGTGGGCAATGCTTATTTCTGGTGTTGCGATGAATTTACGCCATCCAATTT
GGCACATTGATATCACTAAATGGGACATATCAATTATATTATTTTTAATCTTTGGTATTATCGGTGGTACCGCACTCGCA
TTTTATTTCTTTATCGACAGTTTACAATACATATCAGCGAAAGAAACAACATTATTCGGAACTGTTGAACCTGTCGTAGC
CGTTATCGCAAGCAGTCTATGGTTACATGTGGCATTCAAACCATTTCAAATCGTAGGCATCATTCTTATTATGATTTTAA
TTTTATTACTATCACTTAAAAGACAACCTGAAGCATTAGATGAATAA

Upstream 100 bases:

>100_bases
CATTTCACTCTTTCTTAAAAGTCGATATAATGAATTAAATCATTATCATACACCGACATATTTTATGTTGTTGGTGTTAA
GTTTTAAAGGGGTGAGATAC

Downstream 100 bases:

>100_bases
GAAAACTCTGATAATCACTTTAGCAAGTAACTATTTTTAACAACGTAGCTACCTTGTATGTGATATCAGAGTTTTTTATT
TTAATTAATAATATTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMYKMMQPKRSIFSVFQDRRMLG
KLLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFSNLV
VNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILFLIFGIIGGTALA
FYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLKRQPEALDE

Sequences:

>Translated_308_residues
MANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMYKMMQPKRSIFSVFQDRRMLG
KLLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFSNLV
VNPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILFLIFGIIGGTALA
FYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLKRQPEALDE
>Mature_307_residues
ANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMYKMMQPKRSIFSVFQDRRMLGK
LLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYIIIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFSNLVV
NPASLFWGILAGVALAFYTIYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILFLIFGIIGGTALAF
YFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLKRQPEALDE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=297, Percent_Identity=32.3232323232323, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34282; Mature: 34151

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMY
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH
KMMQPKRSIFSVFQDRRMLGKLLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFSNLVVNPASLFWGILAGVALAFYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHH
IYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILFLIFGIIGGTALA
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
FYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
RQPEALDE
CCCCCCCC
>Mature Secondary Structure 
ANNHSALRLKGIILAIVGACLWGLGGTVSDFLFKYKNINVDWYVTARLVVSGVFLLIMY
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH
KMMQPKRSIFSVFQDRRMLGKLLIFSILGMLVVQYAYMASINTGNAAIATLLQYIAPVYI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IIWFVIRGVAKLTLFDVLAIIMTLLGTFLLLTNGSFSNLVVNPASLFWGILAGVALAFYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHH
IYPSDLLNRFGSILIVGWAMLISGVAMNLRHPIWHIDITKWDISIILFLIFGIIGGTALA
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
FYFFIDSLQYISAKETTLFGTVEPVVAVIASSLWLHVAFKPFQIVGIILIMILILLLSLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
RQPEALDE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]