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The map label for this gene is yjfC [H]

Identifier: 15927967

GI number: 15927967

Start: 2445829

End: 2446743

Strand: Direct

Name: yjfC [H]

Synonym: SA2177

Alternate gene names: 15927967

Gene position: 2445829-2446743 (Clockwise)

Preceding gene: 15927965

Following gene: 15927968

Centisome position: 86.89

GC content: 31.37

Gene sequence:

>915_bases
ATGTATAAAATCAATATTATTAGATCAGATTCCGTCTATAAGAATATACTCAAGGCACCAATAAACGACCGTGATTCAAT
TTTCACTAAAGAAATATTAGTACCTTTTAAAAAGAAATTTGAGGTACAACATATGCCTATTTATAATGATGACAAACAGA
CAATGAGTGCGATTCAATTTTTAGATGCCTTTCAAATTTCTCCCAAAGATTTACGCATGTCTGACCAAATGTCAATACAA
TACCTGAATAATGATTTCTGGAGTAATTGCGAAAAATATTTAAAAGTTGCTATAGATCAATTTTCAAATTATAGTATCTC
ATCTCAAGTTTCTAACTATCATTTCACAGTATTACTTGGAGATAGCCAAAAACCACTTATGTATCTAAATAAAAATCGCG
GTGGTGATGGTGGCATACCAGGTTATATTATGATTTATTTAGTGCCGAGTACAAGTACAATTAATTCTATGAAAAGCTTA
ATTGCACATGAAGTAAATCATAATATGCGCTATCAATATATTGATTGGGATGGCGGAAGTTTGATTGAATTGATTATTGC
AGAAGGATTAGCTGAAAACTATGTAGAATCATTGTATGGTAAAGCGCATATTGGACCGTGGGTAACAAATACTAATTGGA
GTCGTGATAACGTAAAAATTAAAAATACTATTTATAATCATTTACATTTAAAGCATATATTTGAATCGATGCCTTATCTC
TATGGTGATGATATTAATAAACTTCAAGGTAGGCCTATCGTTGGCCTATCTCATGCTGCCGGGTATGCATGTGGCTATCA
CTTGGTAAAATACTTTTTACAAAAAACAAACATACCTATTGAAGTTGCTACAACACTTCCAGCACAAAAAATAATAAATG
AGGTGACTGAATTTTGGCATACACATACACTTTAA

Upstream 100 bases:

>100_bases
AACACTCACATACTTTTCTTATTTTTTTCAATTAGTTACAATTACTGCTTGAAAATCACGTTACGTTATCCTTTATGCTG
ACAACATAAGGAGGTTTATC

Downstream 100 bases:

>100_bases
AAGATATTATTGAAATTACAGGTGTAACTAAAAGAACTTTACATTATTACGATGAAATAGGATTATTAGTTCCAGATAAA
AATGATAAAAATTATCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MYKINIIRSDSVYKNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQFLDAFQISPKDLRMSDQMSIQ
YLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSL
IAHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
YGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL

Sequences:

>Translated_304_residues
MYKINIIRSDSVYKNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQFLDAFQISPKDLRMSDQMSIQ
YLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSL
IAHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
YGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL
>Mature_304_residues
MYKINIIRSDSVYKNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQFLDAFQISPKDLRMSDQMSIQ
YLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSL
IAHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
YGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL

Specific function: Unknown

COG id: COG5504

COG function: function code O; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018728 [H]

Pfam domain/function: PF10026 DUF2268 [H]

EC number: NA

Molecular weight: Translated: 35063; Mature: 35063

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKINIIRSDSVYKNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQF
CEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHH
LDAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLG
HHHHCCCHHHCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEC
DSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSLIAHEVNHNMRYQYIDWDGGS
CCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCH
LIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
YGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWH
CCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
THTL
HCCC
>Mature Secondary Structure
MYKINIIRSDSVYKNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQF
CEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHH
LDAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLG
HHHHCCCHHHCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEEC
DSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSLIAHEVNHNMRYQYIDWDGGS
CCCCCEEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCH
LIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC
YGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWH
CCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
THTL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]