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The map label for this gene is 15927934

Identifier: 15927934

GI number: 15927934

Start: 2409329

End: 2409883

Strand: Direct

Name: 15927934

Synonym: SA2144

Alternate gene names: NA

Gene position: 2409329-2409883 (Clockwise)

Preceding gene: 15927931

Following gene: 15927938

Centisome position: 85.59

GC content: 29.19

Gene sequence:

>555_bases
ATGAAACGACAAGCCAAAATAGAAATTCAAAACGCACTTGTTGATTTGATGGCTGAATATCCTTTTCAAGAAATATCCAC
TAAAATGATTTGCGCGTATTGTAATATTAATCGTTCTACTTTTTATGATTATTACAAAGATAAATTTGATTTATTGGATA
CCATCAACTCAAAGCATAAAGAAAAATTCCAATTTCTTCTAAGCGCGCTACATCATAATTTCGAAAATATTAAACAGGAT
AAGCTTAAACTTTATAAATTCTTCATTATTATTGCTAAGTATATCAAGCACAATGAGCAGTTTTTCAAAGACATTTTAGT
TACCTATCCAATGAAAACATTATTCATAGACTATATAAATTTAGCGAGAGATTACTATCAACAAATTATGAATGACTATA
GTACTACAGTAACCAATAAACAGCTTTATGTTACATATATCATAGGCGGTCAAGCTGGGGTGTTTATTAATTGGCTTTCG
AATGGTTGTAATGAATCACCTGAAGAAGTTGCTGACATTTTATTGGCTAATACGATTAAACTTCAAATCCAATAA

Upstream 100 bases:

>100_bases
CTTTTAAAATTCACTTTATTTATTATAGAGACATGATAACTAAAAAAACACCAACAATTTTTATAAGAGTGTTGGTTAAA
ATTCACAAAGGTGTAACAAT

Downstream 100 bases:

>100_bases
TACGGTTTCATTCTAATAAAGAAATGCTATAAAACAACTAGATAAAGTTAAACCAAATGGATAGATAATAGTACATATGT
TACGGTGCTATCAATATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; TetR Family Transcriptional Regulator; TetR Family Regulatory Protein Of MDR Cluster; TetR Family Regulatory Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHKEKFQFLLSALHHNFENIKQD
KLKLYKFFIIIAKYIKHNEQFFKDILVTYPMKTLFIDYINLARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLS
NGCNESPEEVADILLANTIKLQIQ

Sequences:

>Translated_184_residues
MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHKEKFQFLLSALHHNFENIKQD
KLKLYKFFIIIAKYIKHNEQFFKDILVTYPMKTLFIDYINLARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLS
NGCNESPEEVADILLANTIKLQIQ
>Mature_184_residues
MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHKEKFQFLLSALHHNFENIKQD
KLKLYKFFIIIAKYIKHNEQFFKDILVTYPMKTLFIDYINLARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLS
NGCNESPEEVADILLANTIKLQIQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21854; Mature: 21854

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHK
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
EKFQFLLSALHHNFENIKQDKLKLYKFFIIIAKYIKHNEQFFKDILVTYPMKTLFIDYIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLSNGCNESPEEVADILLANTIK
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHEEHHCCCCCCHHHHHHHHHHHHEE
LQIQ
EEEC
>Mature Secondary Structure
MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHK
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
EKFQFLLSALHHNFENIKQDKLKLYKFFIIIAKYIKHNEQFFKDILVTYPMKTLFIDYIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLSNGCNESPEEVADILLANTIK
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHEEHHCCCCCCHHHHHHHHHHHHEE
LQIQ
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA