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The map label for this gene is ynfA [C]

Identifier: 15927919

GI number: 15927919

Start: 2395351

End: 2395677

Strand: Reverse

Name: ynfA [C]

Synonym: SA2130

Alternate gene names: 15927919

Gene position: 2395677-2395351 (Counterclockwise)

Preceding gene: 15927920

Following gene: 15927918

Centisome position: 85.11

GC content: 38.53

Gene sequence:

>327_bases
ATGTTATATCCGATTTTTATATTTATATTAGCTGGCTTATGTGAAATAGGTGGGGGATACCTGATTTGGCTGTGGCTTAG
GGAAGGACAGTCTTCACTTGTTGGGCTAATAGGCGGTGCGATACTCATGTTATATGGTGTCATTGCGACATTTCAATCAT
TTCCATCATTCGGAAGAGTATATGCAGCATATGGTGGCGTATTTATCATCATGAGTTTGATTTTTGCGATGGTCGTAGAT
AAACAAATGCCAGATAAATATGATGTTATCGGTGCAATCATTTGTATTGTAGGTGTTTTAGTAATGTTGCTACCCAGCAG
AGCTTGA

Upstream 100 bases:

>100_bases
AACGAACTTTTTAAAATGGGAATGTGAAGTAAGAAGAAATGTAAACAAATGATATGTAGCCGATAGATTATTGATAGCAA
ATGTGTGATGGAGTGATTTC

Downstream 100 bases:

>100_bases
ACACTTGTGGTTAGAAGGGAGAAGTAAAAATGATAGTTGAAGTTGAGCACCAAAGACAAGGTGTAGATTTAATCAAAATT
GATAATGATGAAACTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILMLYGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVD
KQMPDKYDVIGAIICIVGVLVMLLPSRA

Sequences:

>Translated_108_residues
MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILMLYGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVD
KQMPDKYDVIGAIICIVGVLVMLLPSRA
>Mature_108_residues
MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILMLYGVIATFQSFPSFGRVYAAYGGVFIIMSLIFAMVVD
KQMPDKYDVIGAIICIVGVLVMLLPSRA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=102, Percent_Identity=39.2156862745098, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2130_STAAN (P67149)

Other databases:

- EMBL:   BA000018
- PIR:   F90033
- RefSeq:   NP_375452.1
- STRING:   P67149
- EnsemblBacteria:   EBSTAT00000000539
- GeneID:   1125057
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA2130
- eggNOG:   COG1742
- GeneTree:   EBGT00050000024226
- HOGENOM:   HBG313568
- OMA:   TRWDVAG
- ProtClustDB:   PRK02237
- BioCyc:   SAUR158879:SA2130-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11759; Mature: 11759

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1013fd00)-; HASH(0x1035fb4c)-; HASH(0x104693f8)-; HASH(0x104603dc)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILMLYGVIATFQSFPSFGRV
CHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YAAYGGVFIIMSLIFAMVVDKQMPDKYDVIGAIICIVGVLVMLLPSRA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILMLYGVIATFQSFPSFGRV
CHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YAAYGGVFIIMSLIFAMVVDKQMPDKYDVIGAIICIVGVLVMLLPSRA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11418146