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The map label for this gene is truncated-SA

Identifier: 15927721

GI number: 15927721

Start: 2198308

End: 2198781

Strand: Direct

Name: truncated-SA

Synonym: SA1949

Alternate gene names: NA

Gene position: 2198308-2198781 (Clockwise)

Preceding gene: 15927720

Following gene: 15927723

Centisome position: 78.1

GC content: 28.27

Gene sequence:

>474_bases
TTGTTTACTTACTTTAAATCAGCATTTAAAAATGCTAAACCACAATTATTAATAACATTGATATATGCACTTATAGCATT
TGCTGTAATTGCAGTTGTATATTTACTTGCTAATTTCCAGCTTGCTAAGTATGCACAAACTATTGCAATTTATTCACAAT
TTGGGCAAAAACCACCAGTAGATGCATATTTAAAAGTTATCGCTGTATTACTTATAGCAGCTGTAGTTTCACTGTTTGTT
TTAGTTCAAATTTTTATCGGAATTACAAATGTTATGAAACGAGCAATGAGTCATGAAAAAGTAAAATTTACCGATTTATT
TATTGCATTTAAAAAAGGTAATTATTTAAAGAGCGTTCTGATCGGTCTTGTATCTATAGCAATGATTATCGTTCTTTCAC
TTCTGACATCATTACTATACAAATTATTTTCTCCAGTATCAGAAATGATTATGAATACATCTTATCAAGAGTAA

Upstream 100 bases:

>100_bases
TCTCTAACTTTAGTCACTTTAATTAATTTTTATTAGATATTAATATGAAAATAACGTGTTTTTTGTTATTGTATTTATAT
GAAGAAAAGGAGGCACCACT

Downstream 100 bases:

>100_bases
ATTACAAAAGAATCATTTAAATCAATACTTTCACTTTGAATACATGTATTTGAAGTGGAAGGTACTTATTTCAAAAATAG
TAAAACCTGTATCTTAAATT

Product: lytic regulatory protein truncated with Tn554

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFV
LVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNTSYQE

Sequences:

>Translated_157_residues
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFV
LVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNTSYQE
>Mature_157_residues
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFV
LVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNTSYQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17575; Mature: 17575

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPV
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHH
IGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNTSYQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPV
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHH
IGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNTSYQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA