Click here to switch to the map view.

The map label for this gene is agrD

Identifier: 15927612

GI number: 15927612

Start: 2080012

End: 2080155

Strand: Direct

Name: agrD

Synonym: SAS066

Alternate gene names: NA

Gene position: 2080012-2080155 (Clockwise)

Preceding gene: 15927611

Following gene: 15927613

Centisome position: 73.9

GC content: 31.94

Gene sequence:

>144_bases
ATGAATACACTTGTTAATATGTTTTTTGATTTTATAATTAAATTAGCTAAAGCAATCGGAATTGTCGGTGGCGTAAACGC
TTGCAGCAGTTTATTTGATGAACCTAAAGTACCCGCTGAATTAACGAATTTATACGACAAATAG

Upstream 100 bases:

>100_bases
CCTTAATAATACATCCATTTTATGCTCAATTTATGTTATTAGGAATTTTAGTGGAATCTATTACATTATTACCTATTTTT
TTCCCTAAGGAGGATTAATC

Downstream 100 bases:

>100_bases
TAAAAGTTATTTTAGAAAGTGTGTAGCATATGGAAACAATAAACAACTTAGCTATGGCCACTTTTCAATTAGTAATACTT
TTTACAGTAGCCAAATTCAT

Product: AgrD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 47

Protein sequence:

>47_residues
MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK

Sequences:

>Translated_47_residues
MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK
>Mature_47_residues
MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5149; Mature: 5149

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA