Click here to switch to the map view.

The map label for this gene is sel

Identifier: 15927584

GI number: 15927584

Start: 2057159

End: 2057881

Strand: Direct

Name: sel

Synonym: SA1816

Alternate gene names: 15927584

Gene position: 2057159-2057881 (Clockwise)

Preceding gene: 15927583

Following gene: 15927586

Centisome position: 73.08

GC content: 28.22

Gene sequence:

>723_bases
ATGAAAAAAAGATTATTATTTGTAATTGTTATTACTTTATTTATTTTTTCTTCTAATCATACAGTCTTATCTAACGGCGA
TGTAGGTCCAGGAAATCTAAGAAATTTTTATACTAAATATGAATATGTGAATTTAAAGAATGTTAAAGACAAAAATTCAC
CAGAATCACACCGCTTAGAATACTCGTATAAAAATGATACATTGTATGCTGAATTTGACAATGAATATATAACTAGTGAT
CTAAAGGGAAAAAATGTCGATGTTTTTGGTATAAGCTATAAATATGGTTCTAACTCTCGTACTATATATGGTGGTGTTAC
TAAAGCAGAAAACAATAAATTAGATTCGCCAAGAATAATACCTATAAATTTAATTATCAATGGCAAGCATCAAACAGTTA
CAACTAAAAGTGTTTCTACAGATAAAAAAATGGTTACCGCACAAGAAATAGATGTCAAACTAAGAAAATACTTGCAAGAT
GAATTTAATATTTATGGACACAATGATACTGGTAAAGGTAAAGAATACGGCACTTCTTCAAAATTTTATAGCGGTTTTGA
TAAGGGGAGTGTAGTATTCCATATGAATGATGGTTCTAATTTCTCGTATGATTTATTTTACACAGGATACGGTCTTCCAG
AAAGCTTCTTAAAAATTTACAAAGATAATAAAACTGTTGATTCAACACAATTTCATCTAGATGTCGAAATTTCAAAAAGA
TGA

Upstream 100 bases:

>100_bases
CCTTTATAACCTTTTGTATTTTTTATGAATTTTCTAAAATTTATTATTCAACTTATATTTATAATGTTATTATAAATATA
ATGAAAAGGAAGTGCCTAAT

Downstream 100 bases:

>100_bases
TTCCAATTATTATAGTTTAGATTCACTGTATAAATAACCGCACTTTCTATTAATATAGAAGTGCGGTTTAATCTATATAT
ATATGCATCCTAAAAAGGCA

Product: extracellular enterotoxin L

Products: NA

Alternate protein names: SEA [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKKRLLFVIVITLFIFSSNHTVLSNGDVGPGNLRNFYTKYEYVNLKNVKDKNSPESHRLEYSYKNDTLYAEFDNEYITSD
LKGKNVDVFGISYKYGSNSRTIYGGVTKAENNKLDSPRIIPINLIINGKHQTVTTKSVSTDKKMVTAQEIDVKLRKYLQD
EFNIYGHNDTGKGKEYGTSSKFYSGFDKGSVVFHMNDGSNFSYDLFYTGYGLPESFLKIYKDNKTVDSTQFHLDVEISKR

Sequences:

>Translated_240_residues
MKKRLLFVIVITLFIFSSNHTVLSNGDVGPGNLRNFYTKYEYVNLKNVKDKNSPESHRLEYSYKNDTLYAEFDNEYITSD
LKGKNVDVFGISYKYGSNSRTIYGGVTKAENNKLDSPRIIPINLIINGKHQTVTTKSVSTDKKMVTAQEIDVKLRKYLQD
EFNIYGHNDTGKGKEYGTSSKFYSGFDKGSVVFHMNDGSNFSYDLFYTGYGLPESFLKIYKDNKTVDSTQFHLDVEISKR
>Mature_240_residues
MKKRLLFVIVITLFIFSSNHTVLSNGDVGPGNLRNFYTKYEYVNLKNVKDKNSPESHRLEYSYKNDTLYAEFDNEYITSD
LKGKNVDVFGISYKYGSNSRTIYGGVTKAENNKLDSPRIIPINLIINGKHQTVTTKSVSTDKKMVTAQEIDVKLRKYLQD
EFNIYGHNDTGKGKEYGTSSKFYSGFDKGSVVFHMNDGSNFSYDLFYTGYGLPESFLKIYKDNKTVDSTQFHLDVEISKR

Specific function: Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the staphylococcal/streptococcal toxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008992
- InterPro:   IPR006126
- InterPro:   IPR006173
- InterPro:   IPR016091
- InterPro:   IPR013307
- InterPro:   IPR006123
- InterPro:   IPR006177 [H]

Pfam domain/function: PF02876 Stap_Strp_tox_C; PF01123 Stap_Strp_toxin [H]

EC number: NA

Molecular weight: Translated: 27496; Mature: 27496

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00277 STAPH_STREP_TOXIN_1 ; PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRLLFVIVITLFIFSSNHTVLSNGDVGPGNLRNFYTKYEYVNLKNVKDKNSPESHRLE
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHEEEEEEEEECCCCCCCCCCHHEEE
YSYKNDTLYAEFDNEYITSDLKGKNVDVFGISYKYGSNSRTIYGGVTKAENNKLDSPRII
EEECCCEEEEEECCCEEECCCCCCCEEEEEEEEEECCCCEEEEECEEECCCCCCCCCEEE
PINLIINGKHQTVTTKSVSTDKKMVTAQEIDVKLRKYLQDEFNIYGHNDTGKGKEYGTSS
EEEEEECCCCCEEEECCCCCCHHEEEHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC
KFYSGFDKGSVVFHMNDGSNFSYDLFYTGYGLPESFLKIYKDNKTVDSTQFHLDVEISKR
HHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKKRLLFVIVITLFIFSSNHTVLSNGDVGPGNLRNFYTKYEYVNLKNVKDKNSPESHRLE
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHEEEEEEEEECCCCCCCCCCHHEEE
YSYKNDTLYAEFDNEYITSDLKGKNVDVFGISYKYGSNSRTIYGGVTKAENNKLDSPRII
EEECCCEEEEEECCCEEECCCCCCCEEEEEEEEEECCCCEEEEECEEECCCCCCCCCEEE
PINLIINGKHQTVTTKSVSTDKKMVTAQEIDVKLRKYLQDEFNIYGHNDTGKGKEYGTSS
EEEEEECCCCCEEEECCCCCCHHEEEHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC
KFYSGFDKGSVVFHMNDGSNFSYDLFYTGYGLPESFLKIYKDNKTVDSTQFHLDVEISKR
HHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3335483; 3584106; 7628431; 8943278; 7552730; 9191070 [H]