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The map label for this gene is ytqB [H]

Identifier: 15927338

GI number: 15927338

Start: 1821125

End: 1821688

Strand: Direct

Name: ytqB [H]

Synonym: SA1582

Alternate gene names: 15927338

Gene position: 1821125-1821688 (Clockwise)

Preceding gene: 15927337

Following gene: 15927341

Centisome position: 64.7

GC content: 32.8

Gene sequence:

>564_bases
ATGAAATTAGAACGTATACTCCCTTTTTCAAAAACACTTATTAAACAACATATAACACCAGAAAGTATTGTTGTGGACGC
AACTTGCGGTAACGGCAATGACACTTTATTTTTAGCCGAACAAGTACCAGAAGGACATGTTTATGGTTTCGACATTCAAG
ATTTAGCTTTGGAAAATACACGTGATAAAGTTAAGGATTTCAATCATGTTTCTTTAATAAAAGATGGACATGAAAATATT
GAACATCATATAAATGATGCACATAAAGGTCATATTGATGCAGCCATCTTTAACCTAGGTTATTTGCCTAAAGGTGATAA
ATCTATCGTGACAAAGCCTGACACGACAATCCAAGCTATTAATTCATTGCTATCATTAATGTCAATTGAAGGTATTATTG
TACTTGTTATATATCATGGTCATAGCGAAGGACAAATTGAGAAGCATGCATTGCTTGATTACTTGAGTACTTTGGATCAA
AAGCATGCGCAAGTTTTGCAATATCAATTTTTAAACCAACGTAATCATGCTCCATTCATTTGTGCCATAGAAAAAATTTC
TTAA

Upstream 100 bases:

>100_bases
TGTGGAGTGTTAATAAATGGGAAGTATTAAATGGCATCGATGCTGAATTAGCACGTAGAAATTCTTATCAAGGCTTGCGT
TACAAGTCTAAGGTGAAGCA

Downstream 100 bases:

>100_bases
GCATTTGCTGCGCTATACTATTTATAATTTAGGATTGAGTAGTCAACATTTGAAAAATTAATACCAACAACAACAAAAAG
AGGTTTTCAACTTAATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENTRDKVKDFNHVSLIKDGHENI
EHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAINSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQ
KHAQVLQYQFLNQRNHAPFICAIEKIS

Sequences:

>Translated_187_residues
MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENTRDKVKDFNHVSLIKDGHENI
EHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAINSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQ
KHAQVLQYQFLNQRNHAPFICAIEKIS
>Mature_187_residues
MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENTRDKVKDFNHVSLIKDGHENI
EHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAINSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQ
KHAQVLQYQFLNQRNHAPFICAIEKIS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 20993; Mature: 20993

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00589 PTS_HPR_SER ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENT
CCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEECCHHHHHHHCC
RDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAI
HHHHHCCCHHHEECCCHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCEEECCCHHHHHH
NSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQKHAQVLQYQFLNQRNHAPFI
HHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
CAIEKIS
EEEEECC
>Mature Secondary Structure
MKLERILPFSKTLIKQHITPESIVVDATCGNGNDTLFLAEQVPEGHVYGFDIQDLALENT
CCCHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEECCHHHHHHHCC
RDKVKDFNHVSLIKDGHENIEHHINDAHKGHIDAAIFNLGYLPKGDKSIVTKPDTTIQAI
HHHHHCCCHHHEECCCHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCEEECCCHHHHHH
NSLLSLMSIEGIIVLVIYHGHSEGQIEKHALLDYLSTLDQKHAQVLQYQFLNQRNHAPFI
HHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
CAIEKIS
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]