Click here to switch to the map view.

The map label for this gene is yqgN [H]

Identifier: 15927130

GI number: 15927130

Start: 1584816

End: 1585355

Strand: Reverse

Name: yqgN [H]

Synonym: SA1380

Alternate gene names: 15927130

Gene position: 1585355-1584816 (Counterclockwise)

Preceding gene: 15927131

Following gene: 15927129

Centisome position: 56.32

GC content: 29.81

Gene sequence:

>540_bases
GTGACTAAAAATGAGATTAGAAAATACATTTTACATAAAATGAAGAATTTTAATAAAGCTGAAAAGCGAAAAGCAGACAC
ATGGTTAAGAAATCAATTTTTTGCAACTGAAGAATACAAAGAAGCAAACGCAATTGCGCTAGTTCTTTCTTTTAATCATG
AAGTAGATACTTTTTCTATTATTGAACAAGCCTTAATGGATCATAAACGTATTTTTGTACCGAAAATGGATTATTTAAAT
CATCAAATGACTTTTAAAGAAATATTTAATCTCAAAGATATTGATGTCGATAATAAGGGGATTTACTATCCAACTTCAAA
AGGTGAAACAACGAATAACCTAGATTTAATTGTTGTTCCTGGTGTTGGATTTCAAGACGATGGATATAGAATTGGGTATG
GTGGTGGCTATTACGACAGGTTTTTAGCTAATTATCAGACAAAGACAATAAGCTTATTATACGATTTTCAAATAACATCA
TTTGAACCGGAATCATTCGATCAACCAGTCGATAAATTGATTATATATCAATCAGCATAG

Upstream 100 bases:

>100_bases
AAATAATAAATTTTAGAATTGTCGCATAATTCATCATGACAACATAATGACATGTATTGTTATTAACGATATAATAGAAT
TGAATAAAGTGGGTGATAAT

Downstream 100 bases:

>100_bases
TGGAGGACTAAATGAACATAGACAAACAATTTTGGAAAACAATATATTATTGGATTAGGTACTTGAATTTTGATATTGTC
AGTAGGGAAAAAGATGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLN
HQMTFKEIFNLKDIDVDNKGIYYPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITS
FEPESFDQPVDKLIIYQSA

Sequences:

>Translated_179_residues
MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLN
HQMTFKEIFNLKDIDVDNKGIYYPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITS
FEPESFDQPVDKLIIYQSA
>Mature_178_residues
TKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANAIALVLSFNHEVDTFSIIEQALMDHKRIFVPKMDYLNH
QMTFKEIFNLKDIDVDNKGIYYPTSKGETTNNLDLIVVPGVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSF
EPESFDQPVDKLIIYQSA

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Homo sapiens, GI5453746, Length=172, Percent_Identity=27.3255813953488, Blast_Score=74, Evalue=8e-14,
Organism=Escherichia coli, GI1789278, Length=148, Percent_Identity=29.7297297297297, Blast_Score=68, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17510857, Length=151, Percent_Identity=27.8145695364238, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21016; Mature: 20885

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANAIALVLSFNHEVDTFSI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEECCCCCCHHHH
IEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIYYPTSKGETTNNLDLIVVP
HHHHHHCCCEEECCCHHHHCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
GVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSFEPESFDQPVDKLIIYQSA
CCCCCCCCEEEECCCCHHHHHHHCCCCEEEEEEEEEEEECCCCHHHCCCHHHEEEEECC
>Mature Secondary Structure 
TKNEIRKYILHKMKNFNKAEKRKADTWLRNQFFATEEYKEANAIALVLSFNHEVDTFSI
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEEECCCCCCHHHH
IEQALMDHKRIFVPKMDYLNHQMTFKEIFNLKDIDVDNKGIYYPTSKGETTNNLDLIVVP
HHHHHHCCCEEECCCHHHHCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC
GVGFQDDGYRIGYGGGYYDRFLANYQTKTISLLYDFQITSFEPESFDQPVDKLIIYQSA
CCCCCCCCEEEECCCCHHHHHHHCCCCEEEEEEEEEEEECCCCHHHCCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]