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The map label for this gene is scpB

Identifier: 15927075

GI number: 15927075

Start: 1534159

End: 1534701

Strand: Reverse

Name: scpB

Synonym: SA1325

Alternate gene names: 15927075

Gene position: 1534701-1534159 (Counterclockwise)

Preceding gene: 15927076

Following gene: 15927074

Centisome position: 54.52

GC content: 31.49

Gene sequence:

>543_bases
TTGGATAATCATGGTATATTAGAGTCGCTTTTATTTACAGCTGGCGATGAAGGTTTAGATGAAAAACAACTATTAGAAAT
ATTAGATATGTCGAAAGACCAACTCGTTGAATTAATTGAAAATTATTCATCACATGGATTAATGATACAACGATTTGGAA
CGACGTATGTTTTAACGACTAAAAAAGAAGCGGCAACGTATATTGAACAATTAATTGAACAAAAGTCACAAATGAAATTA
TCACAAGCAGCAATGGAAGTACTATCAATTATTGCTTATAACCAGCCATTATCAAGAAGTGATATTGAATTAATTCGTAG
TATCAATTCAGATGGTGCAGTTAAGACATTGATTGCCAAAGGACTAGTTGAGGCTAAAGTGGTTAATGAACAGCGTAGCC
AACAGTTAATTACTACTGATTTATTTTTAAATGTATTTGGTATTTCCAATATAGAAGATTTGCCGACAACTGAAGAAGAC
GATGAAGAAATGGATGCTTTTTTCAGTAATCTAGTCAATCAAAAAGGAGAAAATAATGACTAA

Upstream 100 bases:

>100_bases
TTTTTAGCTATTTTAGAGATGTCAAAAGCAGGAATAATTAATATTGAGCAACAACGTAATTTTGAAGATATTAACATTAT
TAGAGGAGTGAACTACCATT

Downstream 100 bases:

>100_bases
AGAATTAGAACGATTACAAAAACGTATAGCTAATAGCGGTTATACTTCAAGACGTAAGGCAGAAACTTTAATTTCTGAAG
GAAAAGTGAAAGTGAATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSSHGLMIQRFGTTYVLTTKKEAATYIEQLIEQKSQMKL
SQAAMEVLSIIAYNQPLSRSDIELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEED
DEEMDAFFSNLVNQKGENND

Sequences:

>Translated_180_residues
MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSSHGLMIQRFGTTYVLTTKKEAATYIEQLIEQKSQMKL
SQAAMEVLSIIAYNQPLSRSDIELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEED
DEEMDAFFSNLVNQKGENND
>Mature_180_residues
MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSSHGLMIQRFGTTYVLTTKKEAATYIEQLIEQKSQMKL
SQAAMEVLSIIAYNQPLSRSDIELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEED
DEEMDAFFSNLVNQKGENND

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPB_STAA1 (A7X2K7)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442072.1
- ProteinModelPortal:   A7X2K7
- SMR:   A7X2K7
- STRING:   A7X2K7
- EnsemblBacteria:   EBSTAT00000003435
- GeneID:   5560074
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1482
- eggNOG:   COG1386
- GeneTree:   EBGT00050000025821
- HOGENOM:   HBG752450
- OMA:   ITDNFFK
- ProtClustDB:   CLSK885388
- BioCyc:   SAUR418127:SAHV_1482-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01804
- InterPro:   IPR005234
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PIRSF:   PIRSF019345
- TIGRFAMs:   TIGR00281

Pfam domain/function: PF04079 DUF387

EC number: NA

Molecular weight: Translated: 20206; Mature: 20206

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSSHGLMIQRFGTTYVLTT
CCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCEEEEEC
KKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDIELIRSINSDGAVKTLIAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
GLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEEDDEEMDAFFSNLVNQKGENND
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSSHGLMIQRFGTTYVLTT
CCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCEEEEEC
KKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDIELIRSINSDGAVKTLIAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
GLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEEDDEEMDAFFSNLVNQKGENND
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA