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The map label for this gene is comFA [H]

Identifier: 15926427

GI number: 15926427

Start: 803795

End: 804697

Strand: Direct

Name: comFA [H]

Synonym: SA0705

Alternate gene names: 15926427

Gene position: 803795-804697 (Clockwise)

Preceding gene: 15926426

Following gene: 15926428

Centisome position: 28.56

GC content: 31.89

Gene sequence:

>903_bases
ATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCACCGCGTGTAGATGTTGTTGT
AGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCAGCAATCAAGTCAACAATTTG
AAGGGCATTTTGTTGTATGCACAGTACATCAACTTTACCGATTCAAACAGCACTTTGATACTATTTTTATTGATGAAGTC
GATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAAGTTGAACATGCAACGATTTA
TATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAAATTGCCAGCTCGCTTTCATA
AAAAATCACTTCCAGTTCCTAAATATCGTTATTTCAAACTTAATAATAATAAGATTCAGAAAATGTTATACCGAATTTTA
CAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATGATTAAAACATTTTCGGTTTA
TAAGCAGAAAATTACTAAATTAACATACGTCCATAGCGAGGATGTTTTTCGCTTTGAAAAAGTTGAACAATTAAGGAATG
GACATTTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATTTGGATGTTGTTGTTATCGAT
GCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTAGAATGTCCTGCTGGAAAAGT
ATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAGGATGAACAAATTAGCATTAA
AAAGAGGTTGGATTGATGAATAA

Upstream 100 bases:

>100_bases
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCCGTAA
CAGGTGCAGGTAAGACAGAA

Downstream 100 bases:

>100_bases
TTGTTTGAGTTGTGGTGCTAAGTTATATGAAAATATAACCATTTATAATTTGTTCAAGAAACCTAATAGATTATGTGACA
GATGCAAAGAGAATTGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-dependent helicase ComFA [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEV
DAFPLSMDKSLQQALKSSSKVEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRIL
QDQINNQRYTLVFFNNIETMIKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVID
AHQYTQEALIQIAGRVGRKLECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Sequences:

>Translated_300_residues
MMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEV
DAFPLSMDKSLQQALKSSSKVEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRIL
QDQINNQRYTLVFFNNIETMIKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVID
AHQYTQEALIQIAGRVGRKLECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE
>Mature_300_residues
MMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEV
DAFPLSMDKSLQQALKSSSKVEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRIL
QDQINNQRYTLVFFNNIETMIKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVID
AHQYTQEALIQIAGRVGRKLECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE

Specific function: Involved in transformation (competence for DNA uptake). Required for DNA uptake but not for binding. May provide the driving force for transport of DNA through an aqueous channel [H]

COG id: COG4098

COG function: function code L; Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 35160; Mature: 35160

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVC
CCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEE
TVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSKVEHATIYMTATPPKQLLSEI
EHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHC
PHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
CCCCEECCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVID
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHCCCEEECCEEEEEE
AHQYTQEALIQIAGRVGRKLECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE
CHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVC
CCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEE
TVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSKVEHATIYMTATPPKQLLSEI
EHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHC
PHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
CCCCEECCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHH
IKTFSVYKQKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVID
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHCCCEEECCEEEEEE
AHQYTQEALIQIAGRVGRKLECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE
CHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377 [H]