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The map label for this gene is ykuM [H]

Identifier: 15926349

GI number: 15926349

Start: 723519

End: 724199

Strand: Direct

Name: ykuM [H]

Synonym: SA0627

Alternate gene names: 15926349

Gene position: 723519-724199 (Clockwise)

Preceding gene: 15926348

Following gene: 15926350

Centisome position: 25.7

GC content: 32.75

Gene sequence:

>681_bases
ATGATTATTGAGCATGCCCGTGACATGTTGAAAAGAGAGCGATTATTTTTTGACAAAATGCAGGCACATATTGGTGAAGT
GAATGGAACAATATCAATCGGGTGTTCTTCTTTGATTGGACAAACCTTACTTCCTGAAGTTTTGAGCCTATATAATGCCC
AATTTCCTAATGTTGAAATACAAGTGCAAGTTGGTTCAACTGAACAAATTAAAGCAAATCATAGAGATTATCATGTTATG
ATAACTCGTGGAAATAAGGTAATGAATTTAGCTAACACACATTTATTTAATGATGATCATTATTTTATTTTTCCAAAAAA
TAGACGAGATGATGTTACAAAGTTACCATTTATAGAGTTTCAAGCTGATCCGATTTATATAAATCAAATAAAACAATGGT
ATAACGATAATTTAGAACAAGATTACCATGCAACTATTACAGTGGATCAAGTAGCAACTTGCAAAGAAATGTTGATTAGT
GGTGTAGGTGTTACAATTTTGCCGGAAATTATGATGAAAAATATCAGCAAAGAACAATTTGAGTTTGAAAAAGTAGAAAT
TGATAATGAACCGCTGATTCGTTCGACATTTATGAGTTATGATCCGAGCATGTTGCAATTGCCACAAGTTGATTCTTTTG
TAAATCTCATGGCGAGCTTTGTTGAACAACCAAAGGCGTAG

Upstream 100 bases:

>100_bases
ACCTGCTGTTACACAAAGACTAAAAGCTATTGAAAATGCTTTTGGAGTAGATATTTTTATCAGAACAAAAAAACAATTGA
TTACAACAACTGAAGGAACA

Downstream 100 bases:

>100_bases
TTTTAGACTAATTTAAGGTTTGTATTTAATTTTAAACTATTCGGTTAAATTGAACGTAGTTGTTTGCTAACGCACCAACA
GCAAAAGAGCCCCTAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVM
ITRGNKVMNLANTHLFNDDHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLIS
GVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA

Sequences:

>Translated_226_residues
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVM
ITRGNKVMNLANTHLFNDDHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLIS
GVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA
>Mature_226_residues
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYHVM
ITRGNKVMNLANTHLFNDDHYFIFPKNRRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLIS
GVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 26149; Mature: 26149

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEE
QVQVGSTEQIKANHRDYHVMITRGNKVMNLANTHLFNDDHYFIFPKNRRDDVTKLPFIEF
EEEECCCHHEECCCCCEEEEEECCCEEEEEHHHEEECCCEEEEECCCCCCCCCCCCEEEE
QADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNISKEQF
ECCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
EFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA
EEEEEECCCCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEE
QVQVGSTEQIKANHRDYHVMITRGNKVMNLANTHLFNDDHYFIFPKNRRDDVTKLPFIEF
EEEECCCHHEECCCCCEEEEEECCCEEEEEHHHEEECCCEEEEECCCCCCCCCCCCEEEE
QADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNISKEQF
ECCCCHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
EFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA
EEEEEECCCCCHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]