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The map label for this gene is 15925583

Identifier: 15925583

GI number: 15925583

Start: 2737785

End: 2738372

Strand: Reverse

Name: 15925583

Synonym: SAV2593

Alternate gene names: NA

Gene position: 2738372-2737785 (Counterclockwise)

Preceding gene: 15925585

Following gene: 15925581

Centisome position: 95.13

GC content: 30.1

Gene sequence:

>588_bases
ATGACTATAGATCGACGTATTAGAAAATCACAAGTTGCAATGAGAAATGCATTTATTGAACTTTTACATCAACACCAATT
AGAAGAGATTACTGTGCAACAAATTGCAGATTTAGCTGATGTTAACCGTAGTACATTTTATACGCATTATTATGATAAAT
ATGATTTGCTTGAAAAATTAGAGGACCAGCAGTTGGAGGAAATAAGAGACTTCATTCATGATGAGAAGTTAAATGGAGCA
GTTAAGTTATCCACGGATAACATACATCAAATTATGACTGTTTTAATAGATATGATAGAAAAAGACATCGCATTTTATCA
ATTGATGTTTCGTATGGGTAAAGATTCAAATATACACGAAAAACTATATGACTTAATTATGTGTCATTTACAACGTTATA
AAAATGAAAATGATCAAATTAATGGTATACCATTTTCTTATTTCATGAGTTATGTTTCAGGTGCGGGATTGTCTTTGATA
AGACATTGGGTAGAAGATCCAAACCGTATAGACAAAGTTGACTTAATAATGCATTTTAATACGATTGTCAATCAAGGGCC
AGCAACGATAATTAAAAATATACAATAA

Upstream 100 bases:

>100_bases
CAGGTAAACATTGTGTGCCAATCATCAATGTTGGAGATTTGTGGGATAATGAACATAACGTTTATAATTGTTTATAATCA
TTGGGGAGGACTTGATATAA

Downstream 100 bases:

>100_bases
AATAAGGCAAGCCATGAATCGAGAGTGGCTTGCCTTGCTAAATAACATAAGCTTATTAAATGATATCTTTATCAATAACA
TTATTGTTGGATTGCAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGA
VKLSTDNIHQIMTVLIDMIEKDIAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSLI
RHWVEDPNRIDKVDLIMHFNTIVNQGPATIIKNIQ

Sequences:

>Translated_195_residues
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGA
VKLSTDNIHQIMTVLIDMIEKDIAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSLI
RHWVEDPNRIDKVDLIMHFNTIVNQGPATIIKNIQ
>Mature_194_residues
TIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRDFIHDEKLNGAV
KLSTDNIHQIMTVLIDMIEKDIAFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSLIR
HWVEDPNRIDKVDLIMHFNTIVNQGPATIIKNIQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23121; Mature: 22990

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EDQQLEEIRDFIHDEKLNGAVKLSTDNIHQIMTVLIDMIEKDIAFYQLMFRMGKDSNIHE
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSLIRHWVEDPNRIDKVDLIMHFN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
TIVNQGPATIIKNIQ
HHHHCCHHHHHCCCC
>Mature Secondary Structure 
TIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EDQQLEEIRDFIHDEKLNGAVKLSTDNIHQIMTVLIDMIEKDIAFYQLMFRMGKDSNIHE
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSGAGLSLIRHWVEDPNRIDKVDLIMHFN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
TIVNQGPATIIKNIQ
HHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA