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The map label for this gene is 15924777

Identifier: 15924777

GI number: 15924777

Start: 1918091

End: 1918870

Strand: Direct

Name: 15924777

Synonym: SAV1787

Alternate gene names: NA

Gene position: 1918091-1918870 (Clockwise)

Preceding gene: 15924776

Following gene: 15924781

Centisome position: 66.63

GC content: 29.1

Gene sequence:

>780_bases
ATACAATTTACAAATAGCGACAAATTCTCAATTTTTTTATCCTATGACCTATTTCAAACCCCAACAGATACTAGAACTTT
AATTCCATTTTTAACAATGATTCAAAATACCTTCGGTTATTTACCAGAGTATATTGTAGCTGATGCAGGTTATGATAGTG
AGCAAAACTATATGGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGGCATGTTTATTAAAGATAAAACT
AGAAAGTTTAAAAGTGACATTTTTAACACTCAAAATTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAA
CAAAAGAATAGGTTTTAAAAGATATGCATACCGTAATGATAGATATGGTTTTAAACGTGACTTCAAGCTATATGAATGCG
ATGACTGTTCAGCATGTTCTTTGAGGCAACAATGCATGAAACCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTAT
AATTGGGAATACTTTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAAT
TGATGTAGAGCTTGTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAATGTTA
AACGAGAGCTAGGTTTTGTATTAATGGCACTTAATATAAGGAAAATAGCAGCTCAACGAGCTGTACATTATAAAATACAT
ATCAAAAAAGCTGATTTCTATCAAATAATTAATAGAAATCAACTTTTTTACATTGCCTAA

Upstream 100 bases:

>100_bases
CGATTCTTAAAGATAGAAATAGCTTTTCTAAAACTGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAA
AATGGCCAACTTAAGCCAGG

Downstream 100 bases:

>100_bases
GAACTTAATGTCCCAAGCCCTGACAATTCATCTAACCTTTTCATCAGTTGAGTGATTTTAATCTATCCTTCAAAAGTTTT
TGGATCAGGTCCAATTCTCT

Product: putative transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase Is4 Family Protein; IS4 Family Transposase; Transposase IS4 Family; ISNCY Family Transposase; LOW QUALITY PROTEIN Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein; ISCpe5 Transposase

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQFTNSDKFSIFLSYDLFQTPTDTRTLIPFLTMIQNTFGYLPEYIVADAGYDSEQNYMAIIDDFNKTPLITYGMFIKDKT
RKFKSDIFNTQNWKYDELNDEFICPNNKRIGFKRYAYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNY
NWEYFKAQINQKLSEPETKKIYSQRKIDVELVFGFMKAILGFTRMSVRGINNVKRELGFVLMALNIRKIAAQRAVHYKIH
IKKADFYQIINRNQLFYIA

Sequences:

>Translated_259_residues
MQFTNSDKFSIFLSYDLFQTPTDTRTLIPFLTMIQNTFGYLPEYIVADAGYDSEQNYMAIIDDFNKTPLITYGMFIKDKT
RKFKSDIFNTQNWKYDELNDEFICPNNKRIGFKRYAYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNY
NWEYFKAQINQKLSEPETKKIYSQRKIDVELVFGFMKAILGFTRMSVRGINNVKRELGFVLMALNIRKIAAQRAVHYKIH
IKKADFYQIINRNQLFYIA
>Mature_259_residues
MQFTNSDKFSIFLSYDLFQTPTDTRTLIPFLTMIQNTFGYLPEYIVADAGYDSEQNYMAIIDDFNKTPLITYGMFIKDKT
RKFKSDIFNTQNWKYDELNDEFICPNNKRIGFKRYAYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNY
NWEYFKAQINQKLSEPETKKIYSQRKIDVELVFGFMKAILGFTRMSVRGINNVKRELGFVLMALNIRKIAAQRAVHYKIH
IKKADFYQIINRNQLFYIA

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30922; Mature: 30922

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTNSDKFSIFLSYDLFQTPTDTRTLIPFLTMIQNTFGYLPEYIVADAGYDSEQNYMAI
CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCEEEE
IDDFNKTPLITYGMFIKDKTRKFKSDIFNTQNWKYDELNDEFICPNNKRIGFKRYAYRND
EECCCCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHEEECC
RYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKK
CCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHH
IYSQRKIDVELVFGFMKAILGFTRMSVRGINNVKRELGFVLMALNIRKIAAQRAVHYKIH
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
IKKADFYQIINRNQLFYIA
EEHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MQFTNSDKFSIFLSYDLFQTPTDTRTLIPFLTMIQNTFGYLPEYIVADAGYDSEQNYMAI
CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCEEEE
IDDFNKTPLITYGMFIKDKTRKFKSDIFNTQNWKYDELNDEFICPNNKRIGFKRYAYRND
EECCCCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCHHHEEECC
RYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKK
CCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHHH
IYSQRKIDVELVFGFMKAILGFTRMSVRGINNVKRELGFVLMALNIRKIAAQRAVHYKIH
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
IKKADFYQIINRNQLFYIA
EEHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA