Click here to switch to the map view.

The map label for this gene is 15924775

Identifier: 15924775

GI number: 15924775

Start: 1917398

End: 1917748

Strand: Direct

Name: 15924775

Synonym: SAV1785

Alternate gene names: NA

Gene position: 1917398-1917748 (Clockwise)

Preceding gene: 15924774

Following gene: 15924776

Centisome position: 66.61

GC content: 29.91

Gene sequence:

>351_bases
ATTTCGCGATATGTAAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAAC
ATCCTATCATCCAAAAATGATGTTAAAAATCATCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAGA
AATTACTTCATGACAGTATTCGAATGATGTGGTTAGCTCAAGATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGA
GTGAATCCTAATACTGATGCGTTAATTGAATCTTTATTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTATTGA
TAATAATTCAATTTTTATTGATGGTACATAA

Upstream 100 bases:

>100_bases
ATTAACATGTAATTTTACTTTTACATACTTTAAAAAAATAAGACACTTTGCCCAACTTACACTACCAATAGAAACTTCTG
TTAGAATTCCTTAAAATGAT

Downstream 100 bases:

>100_bases
GTAGAAGCTAATGCCAATAGATATACATTTGTGTGGAAGAAAAGTATTCAAAATCACGAGAAGAAATAGATTTAATTGGT
AGTCATTTAGATAAAGAAAT

Product: putative transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase Is4 Family Protein; Transposase IS4 Family; IS4 Family Transposase; Transposase Is4 Family; Transposase ; ISNCY Family Transposase

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLLHDSIRMMWLAQDQTPSYKTINRFR
VNPNTDALIESLFIQFHSQCLKQNLIDNNSIFIDGT

Sequences:

>Translated_116_residues
MSRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLLHDSIRMMWLAQDQTPSYKTINRFR
VNPNTDALIESLFIQFHSQCLKQNLIDNNSIFIDGT
>Mature_115_residues
SRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLLHDSIRMMWLAQDQTPSYKTINRFRV
NPNTDALIESLFIQFHSQCLKQNLIDNNSIFIDGT

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13729; Mature: 13598

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLLHDSI
CHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RMMWLAQDQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLIDNNSIFIDGT
HHHHHCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
SRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLLHDSI
HHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RMMWLAQDQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLIDNNSIFIDGT
HHHHHCCCCCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA