Click here to switch to the map view.

The map label for this gene is yjbI [H]

Identifier: 15923993

GI number: 15923993

Start: 1052856

End: 1053221

Strand: Reverse

Name: yjbI [H]

Synonym: SAV1003

Alternate gene names: 15923993

Gene position: 1053221-1052856 (Counterclockwise)

Preceding gene: 15923994

Following gene: 57634621

Centisome position: 36.59

GC content: 34.97

Gene sequence:

>366_bases
ATGACAACAACACCATATGACATCATTGGTAAAGAAGCGTTATACGATATGATTGATTATTTTTACACCCTTGTAGAAAA
AGATGAACGACTTAATCACCTGTTTCCAGGAGATTTTGCAGAAACAAGTCGTAAACAAAAACAATTTTTAACACAGTTTT
TGGGCGGTCCAAACATTTATACCGAAGAACACGGACATCCTATGCTAAGAAAAAGACATATGGATTTTACAATCACTGAA
TTTGAAAGAGATGCATGGTTAGAAAATATGCAGACAGCAATTAATCGCGCTGCGTTTCCACAAGGTGTTGGAGATTATTT
ATTTGAGCGCTTAAGATTAACTGCTAATCATATGGTGAATTCCTAA

Upstream 100 bases:

>100_bases
GGCAAATATGCATATTTCTTCCAAATGTTTAAAATCATGTTATATTAGTTATATATTAACTTAAGTTCGTAATAGTAAAT
TTTTGAAAATGGGTGATTAA

Downstream 100 bases:

>100_bases
AATTAATTGTAGGTGAATAAACATGGCTGGAGAATTACGAATAATGGAAAATAAGAGTCGTGAAGATATTAATCTATCAC
CTGTAAGTAAAATCGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSRKQKQFLTQFLGGPNIYTEEHGHPMLRKRHMDFTITE
FERDAWLENMQTAINRAAFPQGVGDYLFERLRLTANHMVNS

Sequences:

>Translated_121_residues
MTTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSRKQKQFLTQFLGGPNIYTEEHGHPMLRKRHMDFTITE
FERDAWLENMQTAINRAAFPQGVGDYLFERLRLTANHMVNS
>Mature_120_residues
TTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSRKQKQFLTQFLGGPNIYTEEHGHPMLRKRHMDFTITEF
ERDAWLENMQTAINRAAFPQGVGDYLFERLRLTANHMVNS

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 14298; Mature: 14167

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSRKQKQFLTQFLGGPNIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
TEEHGHPMLRKRHMDFTITEFERDAWLENMQTAINRAAFPQGVGDYLFERLRLTANHMVN
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
S
C
>Mature Secondary Structure 
TTTPYDIIGKEALYDMIDYFYTLVEKDERLNHLFPGDFAETSRKQKQFLTQFLGGPNIY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
TEEHGHPMLRKRHMDFTITEFERDAWLENMQTAINRAAFPQGVGDYLFERLRLTANHMVN
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]