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The map label for this gene is ssb-p

Identifier: 15923854

GI number: 15923854

Start: 925247

End: 925672

Strand: Direct

Name: ssb-p

Synonym: SAV0864

Alternate gene names: 15923854

Gene position: 925247-925672 (Clockwise)

Preceding gene: 15923853

Following gene: 15923855

Centisome position: 32.14

GC content: 37.09

Gene sequence:

>426_bases
ATGTTAAACAGAACAGTATTAGTAGGACGATTAACAAAAGACCCAGAATTAAGAAGCACGCCAAATGGTGTAAATGTAGG
GACATTCACATTAGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCGTTGGCAGGTGTAGACGGACGACTACAAACACGT
AACTATGAAAACAAAGACGGGCAACGTGTATTTGTTACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACAAAACAACAATTATCAACAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAACAACGCAG
ACTCTATAGAGGATCTTCCTTTTTAG

Upstream 100 bases:

>100_bases
AAATCTCAAACATTAATAAATTGAGTCAAAAACAAATCGCAGAAGCGCACCAAAAATTAGATGCGGGATTAAAACAATTG
GATAGTGAGGAGAAACAATA

Downstream 100 bases:

>100_bases
GAGGCGTTAGATGAACGAATTATGGAAAGATGTTGTAGGTTACGAGGGCATATACGAAGTAAGCAGTAAAGGTAGAGTTA
GAACTCACAAAAATAAAGTT

Product: single strand DNA binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
NYENKDGQRVFVTEVVADSVQFLEPKNNNQQQNNNYQQQRQTQTGNNPFDNNADSIEDLPF

Sequences:

>Translated_141_residues
MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
NYENKDGQRVFVTEVVADSVQFLEPKNNNQQQNNNYQQQRQTQTGNNPFDNNADSIEDLPF
>Mature_141_residues
MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
NYENKDGQRVFVTEVVADSVQFLEPKNNNQQQNNNYQQQRQTQTGNNPFDNNADSIEDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair. This specific ssb is encoded in the phi mu1 prophage and may be involved in phage replication

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=98, Percent_Identity=40.8163265306122, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSBP_STAAM (Q932A8)

Other databases:

- EMBL:   BA000017
- RefSeq:   NP_371388.1
- ProteinModelPortal:   Q932A8
- SMR:   Q932A8
- STRING:   Q932A8
- EnsemblBacteria:   EBSTAT00000006162
- GeneID:   1120839
- GenomeReviews:   BA000017_GR
- KEGG:   sav:SAV0864
- eggNOG:   COG0629
- GeneTree:   EBGT00050000024614
- HOGENOM:   HBG755544
- OMA:   MQMLGTR
- ProtClustDB:   CLSK884960
- BioCyc:   SAUR158878:SAV0864-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 15910; Mature: 15910

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECEECCCCCCCCCCEEEEEEEHHHHHH
VKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTEVVADSVQFLEPKNNNQQQNNNYQQQR
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QTQTGNNPFDNNADSIEDLPF
HHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECEECCCCCCCCCCEEEEEEEHHHHHH
VKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTEVVADSVQFLEPKNNNQQQNNNYQQQR
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QTQTGNNPFDNNADSIEDLPF
HHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146