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The map label for this gene is int [H]

Identifier: 15923382

GI number: 15923382

Start: 436071

End: 437264

Strand: Reverse

Name: int [H]

Synonym: SAV0392

Alternate gene names: 15923382

Gene position: 437264-436071 (Counterclockwise)

Preceding gene: 15923383

Following gene: 15923377

Centisome position: 15.19

GC content: 32.83

Gene sequence:

>1194_bases
ATGGTTAAAGACCCAATAAAAAAAGCAAAGAATGGAACCTATTATTTTCGTGCAAATCTAGGTTATGATTCTAAAGGGAA
AAAAATTCAAAAATATCGTAGTGGATTCACTACTAAAAAAGAAGCAAGAGAAGAATATTCGAAACTGCTATTGATGAAAC
CAGAAGAATTAAGTGAGAATAAGGATAAAATGACGTTTAAACATTATATCTTTGAAATTTTCCTTCCATGGTATAAGACA
CAGGTAAAGCTCAGAACATATGAAAATCGCTTACCAACTATTAAGAAGCATTTCTCTTATTTTGATAAAATGGCTGTTTC
CGATATTGAGCCTATTGATGTGCAAAATTGGCAACTAAAATTATCAAAGAAGTGTAAGTCTTCTTATGTAAGAGCTGTTC
AAGGACTATTTTCAGTTGCTATGGATCGAGCAATTGTCCTTGGGATAACCACCACAAATCCATCTAAGATTATTGGCAAT
GTGAAAAAGCAAAAGTCTAAAATTGAATTTTGGACAAAAGAAGAATTTGAAAAAGTAATCTCTCTAATTTACAAAGAAGA
TTACTATCAACACTTTTTATTTATCTCTCTGTGGTTTTTATTTATGACTGGAATGCGAATTGGTGAAGCTACTGCCATTC
AATGGGAAGATATTGATTTTGACTCAGGAGTACTAACCATCAACAAAACACTCTATTACAAGAATCAATCGAATTATAGA
TTTGTTGAACCAAAAACAAAGGCGAGCGTTCGTCATATTGTATTAGATAAATGCACATTAACTTATTTATCCGAATGGAA
GGAAGTACAACAAAATCTAATTCAGACAGACTTTGTAATGAGCTATAACGGTATTCCTACCCAAAAACATACACTATCAT
ATGCTATTGAACGCTATGCTAAGCTGGCTGGTATCCATCGAATCAGAATCCATGGGTTACGGCATTCTCATGCTTCCTTG
TTAATCAGTATGGGAGAAAATCCACTTATCATTAAAGATCGTCTAGGACACGAAGATATTGAGACGACTTTAGGAACGTA
TGGACATCTTTATCCTAACAGTAATTTCGAGGTAGCTAACAAATTAAATGGAGCCATTTCCTTTAAAGAAGCAAAACAAA
ATTATGATACTTCACCAAAGAATCAATTTACTGTAGACTACTTGCGAAACAAAGAAATGAAAAAAGTGCAATAA

Upstream 100 bases:

>100_bases
TAGATAGAGTCCCTCGTGAAGCTGTTGAAGAAATTCTAGGAATTCGGTTTTCAAATGAAAACAGGTCTGAGTAGTTTTTG
CACAGTAAGGAGTAAAAACT

Downstream 100 bases:

>100_bases
AAGTGCAGTAAAAAGATAAGAAGAGCCAGAAACCCTTGGTATAAGAGGATTTCTAGCTCTCCTACAACTATTCCCACTCA
ATTGTGCTTGGTGGTTTTGA

Product: integrase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVKDPIKKAKNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLLLMKPEELSENKDKMTFKHYIFEIFLPWYKT
QVKLRTYENRLPTIKKHFSYFDKMAVSDIEPIDVQNWQLKLSKKCKSSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGN
VKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYR
FVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYAIERYAKLAGIHRIRIHGLRHSHASL
LISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVANKLNGAISFKEAKQNYDTSPKNQFTVDYLRNKEMKKVQ

Sequences:

>Translated_397_residues
MVKDPIKKAKNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLLLMKPEELSENKDKMTFKHYIFEIFLPWYKT
QVKLRTYENRLPTIKKHFSYFDKMAVSDIEPIDVQNWQLKLSKKCKSSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGN
VKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYR
FVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYAIERYAKLAGIHRIRIHGLRHSHASL
LISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVANKLNGAISFKEAKQNYDTSPKNQFTVDYLRNKEMKKVQ
>Mature_397_residues
MVKDPIKKAKNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLLLMKPEELSENKDKMTFKHYIFEIFLPWYKT
QVKLRTYENRLPTIKKHFSYFDKMAVSDIEPIDVQNWQLKLSKKCKSSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGN
VKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYR
FVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYAIERYAKLAGIHRIRIHGLRHSHASL
LISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVANKLNGAISFKEAKQNYDTSPKNQFTVDYLRNKEMKKVQ

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46641; Mature: 46641

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDPIKKAKNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLLLMKPEELSEN
CCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHEEEECCHHHCCC
KDKMTFKHYIFEIFLPWYKTQVKLRTYENRLPTIKKHFSYFDKMAVSDIEPIDVQNWQLK
CHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LSKKCKSSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGNVKKQKSKIEFWTKEEFEKVI
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
SLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEE
FVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYAIERYA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
KLAGIHRIRIHGLRHSHASLLISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVAN
HHHCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHCCCEEECCCCCCHHHH
KLNGAISFKEAKQNYDTSPKNQFTVDYLRNKEMKKVQ
HCCCCEEEHHHHHCCCCCCCCCEEHHHHCCCCHHCCC
>Mature Secondary Structure
MVKDPIKKAKNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLLLMKPEELSEN
CCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHEEEECCHHHCCC
KDKMTFKHYIFEIFLPWYKTQVKLRTYENRLPTIKKHFSYFDKMAVSDIEPIDVQNWQLK
CHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LSKKCKSSYVRAVQGLFSVAMDRAIVLGITTTNPSKIIGNVKKQKSKIEFWTKEEFEKVI
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
SLIYKEDYYQHFLFISLWFLFMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEE
FVEPKTKASVRHIVLDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYAIERYA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
KLAGIHRIRIHGLRHSHASLLISMGENPLIIKDRLGHEDIETTLGTYGHLYPNSNFEVAN
HHHCCEEEEEECCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHCCCEEECCCCCCHHHH
KLNGAISFKEAKQNYDTSPKNQFTVDYLRNKEMKKVQ
HCCCCEEEHHHHHCCCCCCCCCEEHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]