| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15922942
Identifier: 15922942
GI number: 15922942
Start: 2622757
End: 2623662
Strand: Direct
Name: 15922942
Synonym: ST2606
Alternate gene names: NA
Gene position: 2622757-2623662 (Clockwise)
Preceding gene: 15922941
Following gene: 15922943
Centisome position: 97.33
GC content: 34.55
Gene sequence:
>906_bases ATGCCAATCTGTCCTTCATGTGAAATTAAATTTAACAGCTGGTATGATGTTGCAGAACATATAGATCTAATGGCTAATAA GAGGAGTGATAAATCTCATGTTATGTGGCTGAACAGAAATCTGAGTATAAAGAGGCTTAGTAAAGAAGAGTTAGCAAACA AATTAGAGGATTATTTCTCAACTCCAGAAGGCTTAGGAATGTGGATAAGAAAAAGGTTTATTGAGAAGTTCTATGGAGAG AATCCTCATCCCTTCATATTAGCAATGCAAAAACCAACTAGAGGTGTTCTTTTAGGATATGTTATAGAACATCAACACTT CTTAAAGAATTGGGTTAAGGTACTTTCTTCTATTGTATTTAAAACTGACAAAGATGAAGTAGTTGAATACGAGTTAGAAA ACATAGCTGTTGAATTTATAGGATATAAGGGAAGACCATCTCATTATGAGCTTCTACTAAGAATGGGAGAATCACTAGGA ATGCCAAGAGAGAAAATCCTTAATACGCAACCATTACCAGATACTCAATTTGCAATTAACACTTGGAGAAGGATTGCTGA GGAAAAACATTGGTTAATTACTATGGCTAGTATGCATAGTTTAGAGTTAGTTGCAGATCGTAGTTTGAGAAATTATGGGG CAAAACTACACTATTTTGACCCACAAATATTAGTGTCTAACGAATACCCTCAAGCGGTTAAGGATTTTTTGAGAGAGGGG TATGAGGCTGATGTTTCACATGCTGGAGAGGCTTTATACTTAGTTGAAAAATACGCAAAAGGAATGGAGGAAGAGATTCA AGTAAATGTGTTAAAATCATTTGATGCTTTTTCTAAGTATTTATTTGCTAGATTGGAAAGGGGAATTGAATTAGAACCAC AACTTATGAGGGTGATCATAAAATGA
Upstream 100 bases:
>100_bases TACAAGAATTGTTTAACGAGAAGAGGGATGGAAGAATTTTCCTCTCAACTTAATAGTTTTTTGAAACCATGTTTATTAAC ATAAATAAATATATTAATAT
Downstream 100 bases:
>100_bases AGATAATAGTAAATGGAAAAGAAGCTGGAAGTAAAGAAACTGGATGTGCATTATGCGGAGCTACTTGGGGAGAGTATTAT GAAGAGATTGATGGTGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: TENA/THI-4 Domain Protein
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPICPSCEIKFNSWYDVAEHIDLMANKRSDKSHVMWLNRNLSIKRLSKEELANKLEDYFSTPEGLGMWIRKRFIEKFYGE NPHPFILAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVFKTDKDEVVEYELENIAVEFIGYKGRPSHYELLLRMGESLG MPREKILNTQPLPDTQFAINTWRRIAEEKHWLITMASMHSLELVADRSLRNYGAKLHYFDPQILVSNEYPQAVKDFLREG YEADVSHAGEALYLVEKYAKGMEEEIQVNVLKSFDAFSKYLFARLERGIELEPQLMRVIIK
Sequences:
>Translated_301_residues MPICPSCEIKFNSWYDVAEHIDLMANKRSDKSHVMWLNRNLSIKRLSKEELANKLEDYFSTPEGLGMWIRKRFIEKFYGE NPHPFILAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVFKTDKDEVVEYELENIAVEFIGYKGRPSHYELLLRMGESLG MPREKILNTQPLPDTQFAINTWRRIAEEKHWLITMASMHSLELVADRSLRNYGAKLHYFDPQILVSNEYPQAVKDFLREG YEADVSHAGEALYLVEKYAKGMEEEIQVNVLKSFDAFSKYLFARLERGIELEPQLMRVIIK >Mature_300_residues PICPSCEIKFNSWYDVAEHIDLMANKRSDKSHVMWLNRNLSIKRLSKEELANKLEDYFSTPEGLGMWIRKRFIEKFYGEN PHPFILAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVFKTDKDEVVEYELENIAVEFIGYKGRPSHYELLLRMGESLGM PREKILNTQPLPDTQFAINTWRRIAEEKHWLITMASMHSLELVADRSLRNYGAKLHYFDPQILVSNEYPQAVKDFLREGY EADVSHAGEALYLVEKYAKGMEEEIQVNVLKSFDAFSKYLFARLERGIELEPQLMRVIIK
Specific function: Unknown
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35323; Mature: 35192
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPICPSCEIKFNSWYDVAEHIDLMANKRSDKSHVMWLNRNLSIKRLSKEELANKLEDYFS CCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHC TPEGLGMWIRKRFIEKFYGENPHPFILAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVF CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTDKDEVVEYELENIAVEFIGYKGRPSHYELLLRMGESLGMPREKILNTQPLPDTQFAIN CCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHH TWRRIAEEKHWLITMASMHSLELVADRSLRNYGAKLHYFDPQILVSNEYPQAVKDFLREG HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEECCEEEECCCCHHHHHHHHHCC YEADVSHAGEALYLVEKYAKGMEEEIQVNVLKSFDAFSKYLFARLERGIELEPQLMRVII CCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC K C >Mature Secondary Structure PICPSCEIKFNSWYDVAEHIDLMANKRSDKSHVMWLNRNLSIKRLSKEELANKLEDYFS CCCCCCEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHC TPEGLGMWIRKRFIEKFYGENPHPFILAMQKPTRGVLLGYVIEHQHFLKNWVKVLSSIVF CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KTDKDEVVEYELENIAVEFIGYKGRPSHYELLLRMGESLGMPREKILNTQPLPDTQFAIN CCCCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHH TWRRIAEEKHWLITMASMHSLELVADRSLRNYGAKLHYFDPQILVSNEYPQAVKDFLREG HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEECCEEEECCCCHHHHHHHHHCC YEADVSHAGEALYLVEKYAKGMEEEIQVNVLKSFDAFSKYLFARLERGIELEPQLMRVII CCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA