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The map label for this gene is yecD [H]

Identifier: 15922842

GI number: 15922842

Start: 2513606

End: 2514166

Strand: Direct

Name: yecD [H]

Synonym: ST2508

Alternate gene names: 15922842

Gene position: 2513606-2514166 (Clockwise)

Preceding gene: 15922840

Following gene: 15922843

Centisome position: 93.28

GC content: 35.83

Gene sequence:

>561_bases
ATGGCCTGGTTTAACCTTGAAGAGTTAAAAAAGTACATAAGAAGAGATAACTCAGTACTTGTTGTTTGGGATGTACAAGA
AGCATTGGTAAACAGTATTTTCAATAAAGAAGAATTCTTAGGAAAGCTGAAAGAGCTAATCTCAGCAGCTAGACAATATA
ACGTTTCAATAGTTTACACGAAAATTACTCCTTACCCAGAAAGGTTCCAAAATCCAGCGTTTAGAAGAAACTTTAATCCT
GGTGATATAGTCAAAGAAGTTTATCCACAACCAGCTGATGTTGTACTTAACAAAAACACACCTAGCATATTTGTGGGTAC
AAACTTCGAATTAATGTTAAGAAATGTAGGAATTACAACGATTGTATTTACGGGTATTGCTACTGATATTGGTGTTGAAA
CTTCTGCTAGACATGCACAAGCTTTGGGTTTCTTACCGGTAATTGCTAAAGAGGCAGTATCTTCAGCTGATAAGGCAGCA
CATGAAAGATCATTGGCTAACCTTCAAAGGCTAATGTTGGTTCTGAGTAATAAGGAAATCATAGAAAGATGGTCAGCTTA
A

Upstream 100 bases:

>100_bases
TTCGCTTAACATTGATTAAATATATTGTAAAAGACTTATAAAAAATGATGGTTTACTACCGAATAGTTAAGTTTTTTAAC
TATCTCTCCATTATAACCTC

Downstream 100 bases:

>100_bases
ATTCAACTGGAACTTTTTCTGGGTTATTTTTATCGTATAATAATTCTTGAAGTTAAAAACATTAGTATCGTTTATCTTTT
TCTGTTAGGGACGTTCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAWFNLEELKKYIRRDNSVLVVWDVQEALVNSIFNKEEFLGKLKELISAARQYNVSIVYTKITPYPERFQNPAFRRNFNP
GDIVKEVYPQPADVVLNKNTPSIFVGTNFELMLRNVGITTIVFTGIATDIGVETSARHAQALGFLPVIAKEAVSSADKAA
HERSLANLQRLMLVLSNKEIIERWSA

Sequences:

>Translated_186_residues
MAWFNLEELKKYIRRDNSVLVVWDVQEALVNSIFNKEEFLGKLKELISAARQYNVSIVYTKITPYPERFQNPAFRRNFNP
GDIVKEVYPQPADVVLNKNTPSIFVGTNFELMLRNVGITTIVFTGIATDIGVETSARHAQALGFLPVIAKEAVSSADKAA
HERSLANLQRLMLVLSNKEIIERWSA
>Mature_185_residues
AWFNLEELKKYIRRDNSVLVVWDVQEALVNSIFNKEEFLGKLKELISAARQYNVSIVYTKITPYPERFQNPAFRRNFNPG
DIVKEVYPQPADVVLNKNTPSIFVGTNFELMLRNVGITTIVFTGIATDIGVETSARHAQALGFLPVIAKEAVSSADKAAH
ERSLANLQRLMLVLSNKEIIERWSA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=179, Percent_Identity=31.8435754189944, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21070; Mature: 20938

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWFNLEELKKYIRRDNSVLVVWDVQEALVNSIFNKEEFLGKLKELISAARQYNVSIVYT
CCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEE
KITPYPERFQNPAFRRNFNPGDIVKEVYPQPADVVLNKNTPSIFVGTNFELMLRNVGITT
EECCCHHHHCCCHHHCCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCHHHHHHHCCHHH
IVFTGIATDIGVETSARHAQALGFLPVIAKEAVSSADKAAHERSLANLQRLMLVLSNKEI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IERWSA
HHHCCC
>Mature Secondary Structure 
AWFNLEELKKYIRRDNSVLVVWDVQEALVNSIFNKEEFLGKLKELISAARQYNVSIVYT
CCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEE
KITPYPERFQNPAFRRNFNPGDIVKEVYPQPADVVLNKNTPSIFVGTNFELMLRNVGITT
EECCCHHHHCCCHHHCCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCHHHHHHHCCHHH
IVFTGIATDIGVETSARHAQALGFLPVIAKEAVSSADKAAHERSLANLQRLMLVLSNKEI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IERWSA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]