| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922829
Identifier: 15922829
GI number: 15922829
Start: 2504284
End: 2505543
Strand: Direct
Name: 15922829
Synonym: ST2498
Alternate gene names: NA
Gene position: 2504284-2505543 (Clockwise)
Preceding gene: 15922828
Following gene: 15922830
Centisome position: 92.93
GC content: 40.16
Gene sequence:
>1260_bases ATGGCAAAAGTTAACGTGGAAAAGTTAGATGAGCAAAAGAAGATAGCTATTCTCAAAAAGGCAATAGATAAGCTAGGCTT AAGTTACGTCTCACGCCAAATAGGTGTAGATAGGTCAACATTAAACCGTTACGTAAACGGTAAAATTAAGAAGATACCTA ACGAGGTTATTGAGAAAGCCTCAGACCTTCTAACAGTTGAGGAGTTAAACGACATACTCTACGGGCTTAAGAGCACTGAC GTAGACCCTACGACGGCTATAAGCGTCATAGTTAAAGCTAAGACAGATGAGTCCTTTAGGAACTTTTTCTTAACGTTATT ATGGCAAGAGTTAGGAGAGTACATTAAAGAGCCGTCAAATACGTACGTAGTGAGCGATGATGATATAAAGCTATTTGAGA AGATAATGAAGACTCAAAGGGCTAAGAAGACTGCATATATGAGAACTAATTCGCTAAAGCGTGCATTAGCTGAACTGAAT TACGAATTAACACCTACCAGGTTAAAGGAGTACATGCTAGACGTGTTACAAGAGAGTAAGGGGAGAGCCGAAAACGTAGG AAAGGCGTTAAAATTGTTTATCAAGGAAGTTATAAAGCCAAAGAATCCCCGAATTGCAAGGGAATTATACGACGCCGTAA AGATACCTAAGTATGAACGTGAATACACACCAATAAATTTGGAGTTAGAGACGGTTAAGCAAATCTTTAACGCCATAGAA GGCTTAGGGGCTAAGGCTTACTTCCTCATTTTAGCTGAGACTGGTCTAAGGACTGGTGAGGTTTTCAGCCTAAGACTAGA CCAAGTGGACCTGGAAAACCGCGTTATTAGGATAGGAAAAGTGACTAAGACAAAGAGGGCTTACGTAACATTTATCCATC AGCCCACTGTAGAGTGGTTAAAGGAAACGTATCTCCCATACCGTGAACGATTTGTAAGAAGGTATGCTAATTCCCTTAAA GCTTTAAACGTTAACATAGAGCAATGGGAGGCTAAGCTGTTCCCTTTTGACGAGGACGATATAAGGACAGAGATTAAGAT AGCAATGAGAAAAGTGATAGGAAGGGAATTTCGATTATACGATTTACGCTCATTCTTTGCTAGCTATATGTTGAAACAAG GGGTCAGCCCCTTAGTCGTAAACGTGTTACAAGGTAGAACACCGCCTCAACAATTTCAAATCCTTCAAGAACGTTACCTT AACCTATCGGAAAAGGAATTACAAGAGATATACGATAAACACGCCCCGAGGTTACTCTAG
Upstream 100 bases:
>100_bases CGTCATTACTACGTTTTTCTCTATATAAGAAATAGCTAAAATGCAACGACATAAGGTTTTAATGCAACAATGCTATACAT GAAAATAGTGAGCATAATTT
Downstream 100 bases:
>100_bases TCTATGAGAAAGGTCTTAGTTCTACATGTAATACTCATTAAGACTTTTTGTTTATCTATCATAATATAATAATATGAGTA GTATCTTTAACGATATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAKVNVEKLDEQKKIAILKKAIDKLGLSYVSRQIGVDRSTLNRYVNGKIKKIPNEVIEKASDLLTVEELNDILYGLKSTD VDPTTAISVIVKAKTDESFRNFFLTLLWQELGEYIKEPSNTYVVSDDDIKLFEKIMKTQRAKKTAYMRTNSLKRALAELN YELTPTRLKEYMLDVLQESKGRAENVGKALKLFIKEVIKPKNPRIARELYDAVKIPKYEREYTPINLELETVKQIFNAIE GLGAKAYFLILAETGLRTGEVFSLRLDQVDLENRVIRIGKVTKTKRAYVTFIHQPTVEWLKETYLPYRERFVRRYANSLK ALNVNIEQWEAKLFPFDEDDIRTEIKIAMRKVIGREFRLYDLRSFFASYMLKQGVSPLVVNVLQGRTPPQQFQILQERYL NLSEKELQEIYDKHAPRLL
Sequences:
>Translated_419_residues MAKVNVEKLDEQKKIAILKKAIDKLGLSYVSRQIGVDRSTLNRYVNGKIKKIPNEVIEKASDLLTVEELNDILYGLKSTD VDPTTAISVIVKAKTDESFRNFFLTLLWQELGEYIKEPSNTYVVSDDDIKLFEKIMKTQRAKKTAYMRTNSLKRALAELN YELTPTRLKEYMLDVLQESKGRAENVGKALKLFIKEVIKPKNPRIARELYDAVKIPKYEREYTPINLELETVKQIFNAIE GLGAKAYFLILAETGLRTGEVFSLRLDQVDLENRVIRIGKVTKTKRAYVTFIHQPTVEWLKETYLPYRERFVRRYANSLK ALNVNIEQWEAKLFPFDEDDIRTEIKIAMRKVIGREFRLYDLRSFFASYMLKQGVSPLVVNVLQGRTPPQQFQILQERYL NLSEKELQEIYDKHAPRLL >Mature_418_residues AKVNVEKLDEQKKIAILKKAIDKLGLSYVSRQIGVDRSTLNRYVNGKIKKIPNEVIEKASDLLTVEELNDILYGLKSTDV DPTTAISVIVKAKTDESFRNFFLTLLWQELGEYIKEPSNTYVVSDDDIKLFEKIMKTQRAKKTAYMRTNSLKRALAELNY ELTPTRLKEYMLDVLQESKGRAENVGKALKLFIKEVIKPKNPRIARELYDAVKIPKYEREYTPINLELETVKQIFNAIEG LGAKAYFLILAETGLRTGEVFSLRLDQVDLENRVIRIGKVTKTKRAYVTFIHQPTVEWLKETYLPYRERFVRRYANSLKA LNVNIEQWEAKLFPFDEDDIRTEIKIAMRKVIGREFRLYDLRSFFASYMLKQGVSPLVVNVLQGRTPPQQFQILQERYLN LSEKELQEIYDKHAPRLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48860; Mature: 48729
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVNVEKLDEQKKIAILKKAIDKLGLSYVSRQIGVDRSTLNRYVNGKIKKIPNEVIEKA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCHHHHHHH SDLLTVEELNDILYGLKSTDVDPTTAISVIVKAKTDESFRNFFLTLLWQELGEYIKEPSN HHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC TYVVSDDDIKLFEKIMKTQRAKKTAYMRTNSLKRALAELNYELTPTRLKEYMLDVLQESK EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GRAENVGKALKLFIKEVIKPKNPRIARELYDAVKIPKYEREYTPINLELETVKQIFNAIE CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHH GLGAKAYFLILAETGLRTGEVFSLRLDQVDLENRVIRIGKVTKTKRAYVTFIHQPTVEWL CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHEEEEECCHHHHH KETYLPYRERFVRRYANSLKALNVNIEQWEAKLFPFDEDDIRTEIKIAMRKVIGREFRLY HHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHH DLRSFFASYMLKQGVSPLVVNVLQGRTPPQQFQILQERYLNLSEKELQEIYDKHAPRLL HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure AKVNVEKLDEQKKIAILKKAIDKLGLSYVSRQIGVDRSTLNRYVNGKIKKIPNEVIEKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCHHHHHHH SDLLTVEELNDILYGLKSTDVDPTTAISVIVKAKTDESFRNFFLTLLWQELGEYIKEPSN HHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC TYVVSDDDIKLFEKIMKTQRAKKTAYMRTNSLKRALAELNYELTPTRLKEYMLDVLQESK EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC GRAENVGKALKLFIKEVIKPKNPRIARELYDAVKIPKYEREYTPINLELETVKQIFNAIE CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHH GLGAKAYFLILAETGLRTGEVFSLRLDQVDLENRVIRIGKVTKTKRAYVTFIHQPTVEWL CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCHHHEEEEECCHHHHH KETYLPYRERFVRRYANSLKALNVNIEQWEAKLFPFDEDDIRTEIKIAMRKVIGREFRLY HHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHH DLRSFFASYMLKQGVSPLVVNVLQGRTPPQQFQILQERYLNLSEKELQEIYDKHAPRLL HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA