| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yyaJ [H]
Identifier: 15922786
GI number: 15922786
Start: 2454463
End: 2455884
Strand: Direct
Name: yyaJ [H]
Synonym: ST2454
Alternate gene names: 15922786
Gene position: 2454463-2455884 (Clockwise)
Preceding gene: 15922781
Following gene: 15922788
Centisome position: 91.08
GC content: 34.46
Gene sequence:
>1422_bases ATGTCAGATAAGCCTACAAAAGAACAAATCTATAAAAAAGTGGCTGAGTTAACTGCAAGAATTGATAGATTACCTACTAT GGTTTTACCAATCTCAGTGATTCTTGCATTAGCATTTGGATACTTTATAGCATTGTACGATGTAATTGATATTGGTATTG CTTTTTCCGGCACATCCTTACCATATACAGGGTTAACTTCAACTCAGGCTTCCATTGTAGTATCTATGGGATTAGCTGGT TATATCCCAGGAGCAATAATTCTAGGGTATTTTGCTGATAAGTACGGTAGGAAACCAATGTTAATGTTTACTGCATTACT AACAGCTATAGGAAGCTTAGGAAATGCCCTATCATTTAACTTCCCAATGTTTATAGTCTTTAGATTTATAACTGGTATGG GAATTGGTGGTGATTTAATATTAGTACCTACTTACATAGTAGAAATGGTTCCAGCAGTAAAAAGGGGACAGTATTTTAAC CTAGTTTATATTGCTGGATGGGCTGGTTTAGGATTAGGACCATTTCTAGCCTCAGTAATTGATTTATTAAATCCCGCAAT TGGTTGGAGGGTAATATTCTTAATTGGTGCTACTTTAGCATTTATAGTATTAGTAATAAGGTCTCATGCTAGTGAAACTG TAAGAATATTAGCGTTAAAAGGGAAACTTGATGAAGCTGAAAAAATCGTAGCTGAAATGGAAGAGAAAGCAATACAGAAA ACTGGTATACAATTACCACCATATAATCCCTTAAACTATAAAGTTGAGGAGAAAAACCCCTTCACTATATTTAAGAACAA GAAGTACGCAATCAGAATAATTTCAGTAATGCTGTCTATCTTCTTCTTTTATTTTGGAGAATATCCATACTTAACTCAAT TCTTACTATGGGCTGGAGGATTATCAAATCTTACAAAGGCCCAGATTAACGAGTTAACGTTTTTATACGGTTTAGCTGGT GTTGCAACATTTTTAGGTGCTATAGCATTAAGATTTATAGTTGAAAAAGTCAGAAGAGCTATTTTAACTACTTTAGCATA TTTTGTGGGAATGCTATTAGGAGTACTAATTGCTACTATAGGTACTATTAACTATAATGTTCCCTTAGCATTTGGAGGAA TGCTGTTGACAAACTTTATTGGTGTAGGATGGAGTAATCAGTTAAATTACTTAAATGGAACTGAAAATGTACCTACATAT GCTAGAGCAACATCATTTGCTTTCAGTGACGGCGCTGCACATTTAGGAGCTGCAATATCAACAGCAATAATATTGCCAAT TATAAGTAGTCTAGGTGCTCTACCAACTTGGGTATTATTCCAGGTACCAATGGTCATTATGGGGATTGTATTAATCTTTG TATTACCTAATACAATTGGCCAAAGTTTAGAGAAGATAAATGAAGCTGAAGCAGGGGTTTAA
Upstream 100 bases:
>100_bases GTTTAGAGTAATAAGGCTAATGTTAAAGCTGTTAAAACTGTAATGATAAAAATTCAAAGTTGCTTAAAGCTTATATATTC TTAAAAAGTATAAATTTCTG
Downstream 100 bases:
>100_bases ATCCTAAGGCATTCTTTAATTTTTTCTATTAGTATTTCTGCGTCATCTTTTTCTATGTGAACAAAATATCTCCAACTTTC ATCATTGAGGGAAGGAAAGT
Product: sugar transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSDKPTKEQIYKKVAELTARIDRLPTMVLPISVILALAFGYFIALYDVIDIGIAFSGTSLPYTGLTSTQASIVVSMGLAG YIPGAIILGYFADKYGRKPMLMFTALLTAIGSLGNALSFNFPMFIVFRFITGMGIGGDLILVPTYIVEMVPAVKRGQYFN LVYIAGWAGLGLGPFLASVIDLLNPAIGWRVIFLIGATLAFIVLVIRSHASETVRILALKGKLDEAEKIVAEMEEKAIQK TGIQLPPYNPLNYKVEEKNPFTIFKNKKYAIRIISVMLSIFFFYFGEYPYLTQFLLWAGGLSNLTKAQINELTFLYGLAG VATFLGAIALRFIVEKVRRAILTTLAYFVGMLLGVLIATIGTINYNVPLAFGGMLLTNFIGVGWSNQLNYLNGTENVPTY ARATSFAFSDGAAHLGAAISTAIILPIISSLGALPTWVLFQVPMVIMGIVLIFVLPNTIGQSLEKINEAEAGV
Sequences:
>Translated_473_residues MSDKPTKEQIYKKVAELTARIDRLPTMVLPISVILALAFGYFIALYDVIDIGIAFSGTSLPYTGLTSTQASIVVSMGLAG YIPGAIILGYFADKYGRKPMLMFTALLTAIGSLGNALSFNFPMFIVFRFITGMGIGGDLILVPTYIVEMVPAVKRGQYFN LVYIAGWAGLGLGPFLASVIDLLNPAIGWRVIFLIGATLAFIVLVIRSHASETVRILALKGKLDEAEKIVAEMEEKAIQK TGIQLPPYNPLNYKVEEKNPFTIFKNKKYAIRIISVMLSIFFFYFGEYPYLTQFLLWAGGLSNLTKAQINELTFLYGLAG VATFLGAIALRFIVEKVRRAILTTLAYFVGMLLGVLIATIGTINYNVPLAFGGMLLTNFIGVGWSNQLNYLNGTENVPTY ARATSFAFSDGAAHLGAAISTAIILPIISSLGALPTWVLFQVPMVIMGIVLIFVLPNTIGQSLEKINEAEAGV >Mature_472_residues SDKPTKEQIYKKVAELTARIDRLPTMVLPISVILALAFGYFIALYDVIDIGIAFSGTSLPYTGLTSTQASIVVSMGLAGY IPGAIILGYFADKYGRKPMLMFTALLTAIGSLGNALSFNFPMFIVFRFITGMGIGGDLILVPTYIVEMVPAVKRGQYFNL VYIAGWAGLGLGPFLASVIDLLNPAIGWRVIFLIGATLAFIVLVIRSHASETVRILALKGKLDEAEKIVAEMEEKAIQKT GIQLPPYNPLNYKVEEKNPFTIFKNKKYAIRIISVMLSIFFFYFGEYPYLTQFLLWAGGLSNLTKAQINELTFLYGLAGV ATFLGAIALRFIVEKVRRAILTTLAYFVGMLLGVLIATIGTINYNVPLAFGGMLLTNFIGVGWSNQLNYLNGTENVPTYA RATSFAFSDGAAHLGAAISTAIILPIISSLGALPTWVLFQVPMVIMGIVLIFVLPNTIGQSLEKINEAEAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI296080721, Length=159, Percent_Identity=31.4465408805031, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI296080734, Length=159, Percent_Identity=31.4465408805031, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI296080719, Length=159, Percent_Identity=31.4465408805031, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI24497499, Length=159, Percent_Identity=31.4465408805031, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1788074, Length=249, Percent_Identity=28.9156626506024, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788068, Length=255, Percent_Identity=24.3137254901961, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87082404, Length=160, Percent_Identity=31.875, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081723, Length=139, Percent_Identity=29.4964028776978, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1790463, Length=245, Percent_Identity=27.3469387755102, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI87082231, Length=174, Percent_Identity=25.8620689655172, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17554160, Length=386, Percent_Identity=25.6476683937824, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25148667, Length=222, Percent_Identity=27.027027027027, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320745, Length=407, Percent_Identity=21.8673218673219, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6320007, Length=233, Percent_Identity=28.3261802575107, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24640198, Length=457, Percent_Identity=24.0700218818381, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640196, Length=457, Percent_Identity=24.0700218818381, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640200, Length=457, Percent_Identity=24.0700218818381, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51434; Mature: 51303
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPTKEQIYKKVAELTARIDRLPTMVLPISVILALAFGYFIALYDVIDIGIAFSGTSL CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC PYTGLTSTQASIVVSMGLAGYIPGAIILGYFADKYGRKPMLMFTALLTAIGSLGNALSFN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC FPMFIVFRFITGMGIGGDLILVPTYIVEMVPAVKRGQYFNLVYIAGWAGLGLGPFLASVI CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHCCHHHHHHHHH DLLNPAIGWRVIFLIGATLAFIVLVIRSHASETVRILALKGKLDEAEKIVAEMEEKAIQK HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH TGIQLPPYNPLNYKVEEKNPFTIFKNKKYAIRIISVMLSIFFFYFGEYPYLTQFLLWAGG CCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC LSNLTKAQINELTFLYGLAGVATFLGAIALRFIVEKVRRAILTTLAYFVGMLLGVLIATI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTINYNVPLAFGGMLLTNFIGVGWSNQLNYLNGTENVPTYARATSFAFSDGAAHLGAAIS HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH TAIILPIISSLGALPTWVLFQVPMVIMGIVLIFVLPNTIGQSLEKINEAEAGV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDKPTKEQIYKKVAELTARIDRLPTMVLPISVILALAFGYFIALYDVIDIGIAFSGTSL CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC PYTGLTSTQASIVVSMGLAGYIPGAIILGYFADKYGRKPMLMFTALLTAIGSLGNALSFN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC FPMFIVFRFITGMGIGGDLILVPTYIVEMVPAVKRGQYFNLVYIAGWAGLGLGPFLASVI CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHCCHHHHHHHHH DLLNPAIGWRVIFLIGATLAFIVLVIRSHASETVRILALKGKLDEAEKIVAEMEEKAIQK HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH TGIQLPPYNPLNYKVEEKNPFTIFKNKKYAIRIISVMLSIFFFYFGEYPYLTQFLLWAGG CCCCCCCCCCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC LSNLTKAQINELTFLYGLAGVATFLGAIALRFIVEKVRRAILTTLAYFVGMLLGVLIATI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTINYNVPLAFGGMLLTNFIGVGWSNQLNYLNGTENVPTYARATSFAFSDGAAHLGAAIS HHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH TAIILPIISSLGALPTWVLFQVPMVIMGIVLIFVLPNTIGQSLEKINEAEAGV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]