| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yeeF [C]
Identifier: 15922692
GI number: 15922692
Start: 2361301
End: 2362722
Strand: Direct
Name: yeeF [C]
Synonym: ST2360
Alternate gene names: 15922692
Gene position: 2361301-2362722 (Clockwise)
Preceding gene: 15922691
Following gene: 15922693
Centisome position: 87.63
GC content: 33.54
Gene sequence:
>1422_bases ATGGGACTTGCTAAAGGATCTTTGAGTATAAGAGAAGCTTATGGTCAAGCTATGGCAGTTACTGCACCATTAGGTAGTGT AGTTTCTACTACAACAGCCGCAATTACTTATGCTGGTAAGGCAGTAGTTTTTGCTACAGTTTTAGCTCTAATTGGTAGTG CATTATGGATTTACACACTTACAAGGTATTCATCAAAAATAGCCTCGGCTGGAGGATATTACACATATGGTGCAGCAGCA TGGAGAAAGAAAACTCTTGCCTATTATGAGGCTGTTATTGAAGTTATAGCTTATTCAGCTCTAAATGCAGTAAACGCTTT AGCGATATATTTACTCGTTCAAACTTATTCACAAATAGTTAATGTTACTATCCCCGCTTACATATTATACTTATTTATTG CTTTAGGTTTACTTTATCCAACAATAATCTCATTTACGACTCATATAAGAAGTTTGTTAGGTAAAATAGTTAGTGTAAGT GCTACGTTAGAAGTTATTATGCTTTACGCAATGTTTATTTATGCCGTAGCAACTAAGGGCTTTAATTTATCTTATTTTAG TCCTTCTGGTGCATCATTAAGCGCTATAGGTACTGCTATGATATTATCTATTGTAAGTATATCTGGTGCTGGTGCATCAA CATATTTAGGTGAAGAATCTAAAGTACCTAGAAAAACAATAACATTTGGTATGTGGTTGTCTTTAGTAATTGGTGGTTCT GCAATACTAGCTGGTACTTATGGTTTAGTCGCTCTATGGAACGGTTCTTTAACAAGTTTAGAAAATTCTAATCAACCACT TATTCAAGAGTTATTTGCATTTGGGCTTCCTATAGTGATGATCGGATTGCTAATGTCAATAAATAGTTTATTAGCGTCTA ATATAGGTACAACTGTAGGCAGTGCTAGGGTTCTATTTAATTTAGCTAGAGAAAAAGCTATGCCTAAATTATTCGAAAAA ACTAATAGGACACAAGAACCTATTATGGCAACTATGTTCGTAGGAATTCTATCAGCTTTATTTACAATATTTTCGATAAT TATAACAGGATCAGTTCAAAATGCCTTTAACGAGATTAGTGTTGTAACAAGTGTCTTTTGGCTAGCTGGAAGGATAATAG ACGGTTTTGGTGTTCCAGTATTCTATTGGAGGATTAATTCTTTATCACTGCCAGTTTTAATAATTCCAATATCAGCTACA TTAATAAATACTACTGGTGTAATTTTATCATTCCAAACACCCGATGTATTTCAGAGTCTATCAATTTTAGTAATACTTCT ATCAGCAACAGTATGGTACATTGCAAAAGCTAGAAAAGGATTAGCTGGAACTTATGTAGTTGACGATAACAACGAATTGA TTAGTATTGATGAATACATTGAGAAGTTGAAGAAAGAAAAAGTTTTAACGAGTCAAACTTAA
Upstream 100 bases:
>100_bases TTTTTAACGAGTTCTCCCTATAAGCTTTGCTGAAAGTTCCTTGAATAACTAAGGATAATTTTAAAAATATTTAGGACAGA AAAGCTTATAGGGAGATTAG
Downstream 100 bases:
>100_bases ATTGTTCATATCCTAACTTTTTCATGTGAAAACAAAAGTCCTTTTTACTACTTCAATATCTCATTTTATAAATGATGGAA ATACCTGGGTTTTGCCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Permease Related Protein
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MGLAKGSLSIREAYGQAMAVTAPLGSVVSTTTAAITYAGKAVVFATVLALIGSALWIYTLTRYSSKIASAGGYYTYGAAA WRKKTLAYYEAVIEVIAYSALNAVNALAIYLLVQTYSQIVNVTIPAYILYLFIALGLLYPTIISFTTHIRSLLGKIVSVS ATLEVIMLYAMFIYAVATKGFNLSYFSPSGASLSAIGTAMILSIVSISGAGASTYLGEESKVPRKTITFGMWLSLVIGGS AILAGTYGLVALWNGSLTSLENSNQPLIQELFAFGLPIVMIGLLMSINSLLASNIGTTVGSARVLFNLAREKAMPKLFEK TNRTQEPIMATMFVGILSALFTIFSIIITGSVQNAFNEISVVTSVFWLAGRIIDGFGVPVFYWRINSLSLPVLIIPISAT LINTTGVILSFQTPDVFQSLSILVILLSATVWYIAKARKGLAGTYVVDDNNELISIDEYIEKLKKEKVLTSQT
Sequences:
>Translated_473_residues MGLAKGSLSIREAYGQAMAVTAPLGSVVSTTTAAITYAGKAVVFATVLALIGSALWIYTLTRYSSKIASAGGYYTYGAAA WRKKTLAYYEAVIEVIAYSALNAVNALAIYLLVQTYSQIVNVTIPAYILYLFIALGLLYPTIISFTTHIRSLLGKIVSVS ATLEVIMLYAMFIYAVATKGFNLSYFSPSGASLSAIGTAMILSIVSISGAGASTYLGEESKVPRKTITFGMWLSLVIGGS AILAGTYGLVALWNGSLTSLENSNQPLIQELFAFGLPIVMIGLLMSINSLLASNIGTTVGSARVLFNLAREKAMPKLFEK TNRTQEPIMATMFVGILSALFTIFSIIITGSVQNAFNEISVVTSVFWLAGRIIDGFGVPVFYWRINSLSLPVLIIPISAT LINTTGVILSFQTPDVFQSLSILVILLSATVWYIAKARKGLAGTYVVDDNNELISIDEYIEKLKKEKVLTSQT >Mature_472_residues GLAKGSLSIREAYGQAMAVTAPLGSVVSTTTAAITYAGKAVVFATVLALIGSALWIYTLTRYSSKIASAGGYYTYGAAAW RKKTLAYYEAVIEVIAYSALNAVNALAIYLLVQTYSQIVNVTIPAYILYLFIALGLLYPTIISFTTHIRSLLGKIVSVSA TLEVIMLYAMFIYAVATKGFNLSYFSPSGASLSAIGTAMILSIVSISGAGASTYLGEESKVPRKTITFGMWLSLVIGGSA ILAGTYGLVALWNGSLTSLENSNQPLIQELFAFGLPIVMIGLLMSINSLLASNIGTTVGSARVLFNLAREKAMPKLFEKT NRTQEPIMATMFVGILSALFTIFSIIITGSVQNAFNEISVVTSVFWLAGRIIDGFGVPVFYWRINSLSLPVLIIPISATL INTTGVILSFQTPDVFQSLSILVILLSATVWYIAKARKGLAGTYVVDDNNELISIDEYIEKLKKEKVLTSQT
Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50742; Mature: 50611
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAKGSLSIREAYGQAMAVTAPLGSVVSTTTAAITYAGKAVVFATVLALIGSALWIYTL CCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TRYSSKIASAGGYYTYGAAAWRKKTLAYYEAVIEVIAYSALNAVNALAIYLLVQTYSQIV HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVTIPAYILYLFIALGLLYPTIISFTTHIRSLLGKIVSVSATLEVIMLYAMFIYAVATKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FNLSYFSPSGASLSAIGTAMILSIVSISGAGASTYLGEESKVPRKTITFGMWLSLVIGGS CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC AILAGTYGLVALWNGSLTSLENSNQPLIQELFAFGLPIVMIGLLMSINSLLASNIGTTVG HHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH SARVLFNLAREKAMPKLFEKTNRTQEPIMATMFVGILSALFTIFSIIITGSVQNAFNEIS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VVTSVFWLAGRIIDGFGVPVFYWRINSLSLPVLIIPISATLINTTGVILSFQTPDVFQSL HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCHHEEECCCEEEEECCCHHHHHH SILVILLSATVWYIAKARKGLAGTYVVDDNNELISIDEYIEKLKKEKVLTSQT HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GLAKGSLSIREAYGQAMAVTAPLGSVVSTTTAAITYAGKAVVFATVLALIGSALWIYTL CCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH TRYSSKIASAGGYYTYGAAAWRKKTLAYYEAVIEVIAYSALNAVNALAIYLLVQTYSQIV HHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVTIPAYILYLFIALGLLYPTIISFTTHIRSLLGKIVSVSATLEVIMLYAMFIYAVATKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FNLSYFSPSGASLSAIGTAMILSIVSISGAGASTYLGEESKVPRKTITFGMWLSLVIGGS CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC AILAGTYGLVALWNGSLTSLENSNQPLIQELFAFGLPIVMIGLLMSINSLLASNIGTTVG HHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHH SARVLFNLAREKAMPKLFEKTNRTQEPIMATMFVGILSALFTIFSIIITGSVQNAFNEIS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VVTSVFWLAGRIIDGFGVPVFYWRINSLSLPVLIIPISATLINTTGVILSFQTPDVFQSL HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCHHEEECCCEEEEECCCHHHHHH SILVILLSATVWYIAKARKGLAGTYVVDDNNELISIDEYIEKLKKEKVLTSQT HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA