| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is ag45 [H]
Identifier: 15922587
GI number: 15922587
Start: 2265729
End: 2266958
Strand: Direct
Name: ag45 [H]
Synonym: ST2255
Alternate gene names: 15922587
Gene position: 2265729-2266958 (Clockwise)
Preceding gene: 15922584
Following gene: 15922589
Centisome position: 84.08
GC content: 30.73
Gene sequence:
>1230_bases GTGTATCTAGTTGCCTTGATTATTGCAATTTTAGTTTATGGTATGATTGCTTTTAGAGGTTTAACAAGAATACCTCCTTG GACTTCTATGTTTTTTGGCGGAGTTCTGATGATAGTTTTCGGTATTATTAATGTTAATCAAGCTCTTGAATCGATTAATC TTGATGTAATTCTCTTTCTTATCACACTCTTTATTTTTTCATCATCACTTGAAGTATCTGGTTTTCTTAAATATTTAGCT TATTTGATTATAAACAAATATAAGGAAAGTAAGAAAATAATGTTTTATATTCTACTATATTCTGGACTTTTATCAAATTT AGTTACTAATGATGGTGTTTCGGCTAGTTGGACTCCAGTTATATTAGAGGTTTCAAGATATATGAACGTAGATGAAATGC CATACTTATATTCTCTAGCTTTCGGCGTAACAATAGGAAGTGTTATGATGCCTACTGGAAATCCGCAGAATCTTCTTATA GCTCTTGAAGGAAATTTGAAAGAACCTTTTGTCTCGTTCCTAGAATTTTTAGCTATTCCTACTATTCTTAACTTGTTCTT ATCATACTATATTATGTTGCTTCTCTTTAAGAATAGATTAGAAAGTGTAAAAATAGATGATATTAAAATAGACATAAAAT TGAATAAACGTCTTGCTTATTCTTCTCTATTTCTTCTTTTTATAACTGTGATATTATTCTTTATTTTGAGTTTTGTTAGA ATTGACATCCTACTAGCATCTCTTACAACTTCATCAATTCTTCTTTTAATAAGTAGAGAGAGGAGAGAAATAATGAGCAG GGTTGACTGGTCAACAATATTATTTTTTACTGGTCTCTTTATTTTTACAGAAGGTCTTTATAAAGGTGGTATAATTCAAC TATTATACCAAGTTTTACCTCCACCCACCAATGTTCTCCTAATTATGGTTTCTAGTATCTTATTAAGTCAAGTTTTAAGC AATGTACCACTAGTAGCAATATATATCCCAGAAATGATACACCTAGGGGCAACTTCTACTATTGATTGGATTGCATTAGC CGCGGGAAGTACAATAGCGGGTAACTTTACATTAATTGGTGCAGCAAGTAATATAATTATATCTGAAGCTTCAGAAAGCA GAGGAGGAAAAAGTTTTAGTTTCTTTGAATTCATGAAATATTCAATACCAGTTTTGGCAGTTAACTTCGCTATTCTCTAC ATCTTTATTTCTTTGGTTGGAATAATCTAG
Upstream 100 bases:
>100_bases TCACAAAAATTTAGCTTGTAAATAAGGGTTATAAGGGAAATTGCTCTTTAGCGTTTAAATTTTCAGATACTCTTTTTAGT CCTTCACAATTACTTAACTT
Downstream 100 bases:
>100_bases ATACTGCTACCAATTGCATTTCATTAGTTCCTTCTGCTATTTCCATAATTTTTGCATCTCTATATAGTCTTTCAACTTTA GAACCTCTATTTAATCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MYLVALIIAILVYGMIAFRGLTRIPPWTSMFFGGVLMIVFGIINVNQALESINLDVILFLITLFIFSSSLEVSGFLKYLA YLIINKYKESKKIMFYILLYSGLLSNLVTNDGVSASWTPVILEVSRYMNVDEMPYLYSLAFGVTIGSVMMPTGNPQNLLI ALEGNLKEPFVSFLEFLAIPTILNLFLSYYIMLLLFKNRLESVKIDDIKIDIKLNKRLAYSSLFLLFITVILFFILSFVR IDILLASLTTSSILLLISRERREIMSRVDWSTILFFTGLFIFTEGLYKGGIIQLLYQVLPPPTNVLLIMVSSILLSQVLS NVPLVAIYIPEMIHLGATSTIDWIALAAGSTIAGNFTLIGAASNIIISEASESRGGKSFSFFEFMKYSIPVLAVNFAILY IFISLVGII
Sequences:
>Translated_409_residues MYLVALIIAILVYGMIAFRGLTRIPPWTSMFFGGVLMIVFGIINVNQALESINLDVILFLITLFIFSSSLEVSGFLKYLA YLIINKYKESKKIMFYILLYSGLLSNLVTNDGVSASWTPVILEVSRYMNVDEMPYLYSLAFGVTIGSVMMPTGNPQNLLI ALEGNLKEPFVSFLEFLAIPTILNLFLSYYIMLLLFKNRLESVKIDDIKIDIKLNKRLAYSSLFLLFITVILFFILSFVR IDILLASLTTSSILLLISRERREIMSRVDWSTILFFTGLFIFTEGLYKGGIIQLLYQVLPPPTNVLLIMVSSILLSQVLS NVPLVAIYIPEMIHLGATSTIDWIALAAGSTIAGNFTLIGAASNIIISEASESRGGKSFSFFEFMKYSIPVLAVNFAILY IFISLVGII >Mature_409_residues MYLVALIIAILVYGMIAFRGLTRIPPWTSMFFGGVLMIVFGIINVNQALESINLDVILFLITLFIFSSSLEVSGFLKYLA YLIINKYKESKKIMFYILLYSGLLSNLVTNDGVSASWTPVILEVSRYMNVDEMPYLYSLAFGVTIGSVMMPTGNPQNLLI ALEGNLKEPFVSFLEFLAIPTILNLFLSYYIMLLLFKNRLESVKIDDIKIDIKLNKRLAYSSLFLLFITVILFFILSFVR IDILLASLTTSSILLLISRERREIMSRVDWSTILFFTGLFIFTEGLYKGGIIQLLYQVLPPPTNVLLIMVSSILLSQVLS NVPLVAIYIPEMIHLGATSTIDWIALAAGSTIAGNFTLIGAASNIIISEASESRGGKSFSFFEFMKYSIPVLAVNFAILY IFISLVGII
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Homo sapiens, GI157266326, Length=162, Percent_Identity=30.8641975308642, Blast_Score=75, Evalue=9e-14, Organism=Escherichia coli, GI1787039, Length=352, Percent_Identity=23.5795454545455, Blast_Score=65, Evalue=6e-12, Organism=Drosophila melanogaster, GI19920704, Length=147, Percent_Identity=32.6530612244898, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574683, Length=147, Percent_Identity=32.6530612244898, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574681, Length=147, Percent_Identity=32.6530612244898, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574685, Length=147, Percent_Identity=32.6530612244898, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574678, Length=147, Percent_Identity=32.6530612244898, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581759, Length=147, Percent_Identity=32.6530612244898, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 - InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 45767; Mature: 45767
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLVALIIAILVYGMIAFRGLTRIPPWTSMFFGGVLMIVFGIINVNQALESINLDVILFL CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ITLFIFSSSLEVSGFLKYLAYLIINKYKESKKIMFYILLYSGLLSNLVTNDGVSASWTPV HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ILEVSRYMNVDEMPYLYSLAFGVTIGSVMMPTGNPQNLLIALEGNLKEPFVSFLEFLAIP HHHHHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHH TILNLFLSYYIMLLLFKNRLESVKIDDIKIDIKLNKRLAYSSLFLLFITVILFFILSFVR HHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH IDILLASLTTSSILLLISRERREIMSRVDWSTILFFTGLFIFTEGLYKGGIIQLLYQVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PPTNVLLIMVSSILLSQVLSNVPLVAIYIPEMIHLGATSTIDWIALAAGSTIAGNFTLIG CCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHHHHHHCCCCEEECCEEEEE AASNIIISEASESRGGKSFSFFEFMKYSIPVLAVNFAILYIFISLVGII CCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYLVALIIAILVYGMIAFRGLTRIPPWTSMFFGGVLMIVFGIINVNQALESINLDVILFL CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ITLFIFSSSLEVSGFLKYLAYLIINKYKESKKIMFYILLYSGLLSNLVTNDGVSASWTPV HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH ILEVSRYMNVDEMPYLYSLAFGVTIGSVMMPTGNPQNLLIALEGNLKEPFVSFLEFLAIP HHHHHHHCCCCCCCHHHHHHHHHHHCCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHH TILNLFLSYYIMLLLFKNRLESVKIDDIKIDIKLNKRLAYSSLFLLFITVILFFILSFVR HHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH IDILLASLTTSSILLLISRERREIMSRVDWSTILFFTGLFIFTEGLYKGGIIQLLYQVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PPTNVLLIMVSSILLSQVLSNVPLVAIYIPEMIHLGATSTIDWIALAAGSTIAGNFTLIG CCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCHHHHHHHCCCCEEECCEEEEE AASNIIISEASESRGGKSFSFFEFMKYSIPVLAVNFAILYIFISLVGII CCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]