Click here to switch to the map view.

The map label for this gene is ybbK [C]

Identifier: 15922536

GI number: 15922536

Start: 2217615

End: 2218397

Strand: Direct

Name: ybbK [C]

Synonym: ST2208

Alternate gene names: 15922536

Gene position: 2217615-2218397 (Clockwise)

Preceding gene: 15922535

Following gene: 15922537

Centisome position: 82.29

GC content: 33.97

Gene sequence:

>783_bases
ATGATATCAGTTGGAGAAATATTAGGATTAGTATTTCTGGTTATTATAATCCTTATCTTTTTAGCAATGTCTTTTAGGAT
AGTGACTGAATGGCAGAGAGCTGTTGTCTTAAGGCTTGGTAGGGTTCTAGGCGTAAAAGGTCCTGGGATAATATTTCTTA
TACCTTTCGTTGATAGACCTTTATTAGTTGATTTAAGAATAGTTACTGTTGAAGTTCCACCACAGACTATAGTAACAAAA
GATAATGTTACAGTTACTATAGATGCCGTAGTATATTACAAAGTAGTTGATCCTTTAAAGGCTGTTATCAGCGTAAGTAA
CTATCCGGCTGCGGTTTTAAATTATGCTCAGACTTCTCTAAGAGATATTGTTGGTCAAATGGAGTTAGATGAAATATTAA
CAAAAAGAGAAGAGATAAATAGGCGTTTACAAGAGATTCTTGACACTGTTACTGAAGGTTGGGGAATAAAAGTTACTCAA
GTTACGGTTAGAGATATTAGATTATCTCCAGAGCTTTTATCTGCAATGGCAGAGCAAGCTAAAGCTGAAAGATTAAGAAG
AGCTAAAATTATATTAAGTGAAGGAGAGAGACAAGCAGCCAATATATTAGCTGAAGCTTCGCTATCTTATCAAAATAATC
CAGTTGCACTTCAATTAAGGTTCTTAGAAATGTTAAGTGATATTTCTCAAAGGGGTAATATGGTAATAGTAGTTCCAGCT
GGACAAGAATTTTATGCTACCCTCTCTACACTTAAAAATGTAATCACATCGACTAAACAATAA

Upstream 100 bases:

>100_bases
TGTAAATTATCTAATTTTAATCTATATTCTTGGATTCAGTGTCGGGATTGTAATTTCAGCTTTGTTGATAAGATTTAAAC
TCTAAAAACATATTATATTT

Downstream 100 bases:

>100_bases
TCAGATGGACTAGGACACATCAAAGGTCAGTTTGTGGTCTTTTCATCATCTTTTTATTTTTTTATCCTTATCTGTATATA
TGAATGAAAGGGAAGAGGTT

Product: erythrocyte band 7 integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MISVGEILGLVFLVIIILIFLAMSFRIVTEWQRAVVLRLGRVLGVKGPGIIFLIPFVDRPLLVDLRIVTVEVPPQTIVTK
DNVTVTIDAVVYYKVVDPLKAVISVSNYPAAVLNYAQTSLRDIVGQMELDEILTKREEINRRLQEILDTVTEGWGIKVTQ
VTVRDIRLSPELLSAMAEQAKAERLRRAKIILSEGERQAANILAEASLSYQNNPVALQLRFLEMLSDISQRGNMVIVVPA
GQEFYATLSTLKNVITSTKQ

Sequences:

>Translated_260_residues
MISVGEILGLVFLVIIILIFLAMSFRIVTEWQRAVVLRLGRVLGVKGPGIIFLIPFVDRPLLVDLRIVTVEVPPQTIVTK
DNVTVTIDAVVYYKVVDPLKAVISVSNYPAAVLNYAQTSLRDIVGQMELDEILTKREEINRRLQEILDTVTEGWGIKVTQ
VTVRDIRLSPELLSAMAEQAKAERLRRAKIILSEGERQAANILAEASLSYQNNPVALQLRFLEMLSDISQRGNMVIVVPA
GQEFYATLSTLKNVITSTKQ
>Mature_260_residues
MISVGEILGLVFLVIIILIFLAMSFRIVTEWQRAVVLRLGRVLGVKGPGIIFLIPFVDRPLLVDLRIVTVEVPPQTIVTK
DNVTVTIDAVVYYKVVDPLKAVISVSNYPAAVLNYAQTSLRDIVGQMELDEILTKREEINRRLQEILDTVTEGWGIKVTQ
VTVRDIRLSPELLSAMAEQAKAERLRRAKIILSEGERQAANILAEASLSYQNNPVALQLRFLEMLSDISQRGNMVIVVPA
GQEFYATLSTLKNVITSTKQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=234, Percent_Identity=43.1623931623932, Blast_Score=189, Evalue=2e-48,
Organism=Homo sapiens, GI221316744, Length=237, Percent_Identity=42.6160337552743, Blast_Score=181, Evalue=5e-46,
Organism=Homo sapiens, GI21686995, Length=237, Percent_Identity=42.6160337552743, Blast_Score=181, Evalue=5e-46,
Organism=Homo sapiens, GI7657615, Length=252, Percent_Identity=33.7301587301587, Blast_Score=135, Evalue=3e-32,
Organism=Homo sapiens, GI7305503, Length=178, Percent_Identity=36.5168539325843, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI20149563, Length=156, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI4505773, Length=241, Percent_Identity=29.045643153527, Blast_Score=68, Evalue=7e-12,
Organism=Escherichia coli, GI1786697, Length=206, Percent_Identity=39.8058252427184, Blast_Score=153, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17569493, Length=249, Percent_Identity=44.9799196787149, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI193209764, Length=244, Percent_Identity=45.0819672131148, Blast_Score=187, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI71987612, Length=238, Percent_Identity=44.5378151260504, Blast_Score=184, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI25153583, Length=238, Percent_Identity=44.5378151260504, Blast_Score=184, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI193210507, Length=255, Percent_Identity=41.5686274509804, Blast_Score=183, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI17570161, Length=255, Percent_Identity=41.5686274509804, Blast_Score=183, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI71987621, Length=238, Percent_Identity=44.5378151260504, Blast_Score=183, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17569497, Length=243, Percent_Identity=37.8600823045267, Blast_Score=181, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17569499, Length=250, Percent_Identity=39.6, Blast_Score=171, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI32566490, Length=228, Percent_Identity=42.1052631578947, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI71989948, Length=221, Percent_Identity=40.2714932126697, Blast_Score=163, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI17570459, Length=236, Percent_Identity=40.6779661016949, Blast_Score=160, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI71989955, Length=182, Percent_Identity=41.2087912087912, Blast_Score=139, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI32564147, Length=170, Percent_Identity=36.4705882352941, Blast_Score=114, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71989963, Length=121, Percent_Identity=41.3223140495868, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17542664, Length=183, Percent_Identity=28.4153005464481, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6321571, Length=212, Percent_Identity=29.7169811320755, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI45556022, Length=245, Percent_Identity=45.3061224489796, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI18860517, Length=239, Percent_Identity=43.9330543933054, Blast_Score=186, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24657857, Length=232, Percent_Identity=46.551724137931, Blast_Score=184, Evalue=4e-47,
Organism=Drosophila melanogaster, GI62484448, Length=232, Percent_Identity=46.551724137931, Blast_Score=184, Evalue=6e-47,
Organism=Drosophila melanogaster, GI281365664, Length=232, Percent_Identity=46.551724137931, Blast_Score=184, Evalue=6e-47,
Organism=Drosophila melanogaster, GI62484274, Length=232, Percent_Identity=46.551724137931, Blast_Score=183, Evalue=1e-46,
Organism=Drosophila melanogaster, GI281361633, Length=230, Percent_Identity=40.8695652173913, Blast_Score=173, Evalue=1e-43,
Organism=Drosophila melanogaster, GI281361631, Length=230, Percent_Identity=40.8695652173913, Blast_Score=173, Evalue=1e-43,
Organism=Drosophila melanogaster, GI21356845, Length=230, Percent_Identity=38.695652173913, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI28573263, Length=235, Percent_Identity=35.7446808510638, Blast_Score=161, Evalue=4e-40,
Organism=Drosophila melanogaster, GI45550506, Length=185, Percent_Identity=36.2162162162162, Blast_Score=127, Evalue=7e-30,
Organism=Drosophila melanogaster, GI281361635, Length=175, Percent_Identity=40, Blast_Score=126, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24585145, Length=259, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585147, Length=259, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 28997; Mature: 28997

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVGEILGLVFLVIIILIFLAMSFRIVTEWQRAVVLRLGRVLGVKGPGIIFLIPFVDRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
LLVDLRIVTVEVPPQTIVTKDNVTVTIDAVVYYKVVDPLKAVISVSNYPAAVLNYAQTSL
EEEEEEEEEEECCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RDIVGQMELDEILTKREEINRRLQEILDTVTEGWGIKVTQVTVRDIRLSPELLSAMAEQA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCHHHHHHHHHHH
KAERLRRAKIILSEGERQAANILAEASLSYQNNPVALQLRFLEMLSDISQRGNMVIVVPA
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEEC
GQEFYATLSTLKNVITSTKQ
CHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISVGEILGLVFLVIIILIFLAMSFRIVTEWQRAVVLRLGRVLGVKGPGIIFLIPFVDRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
LLVDLRIVTVEVPPQTIVTKDNVTVTIDAVVYYKVVDPLKAVISVSNYPAAVLNYAQTSL
EEEEEEEEEEECCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RDIVGQMELDEILTKREEINRRLQEILDTVTEGWGIKVTQVTVRDIRLSPELLSAMAEQA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHCCCHHHHHHHHHHH
KAERLRRAKIILSEGERQAANILAEASLSYQNNPVALQLRFLEMLSDISQRGNMVIVVPA
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEEC
GQEFYATLSTLKNVITSTKQ
CHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]