| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is glmS [H]
Identifier: 15922514
GI number: 15922514
Start: 2185552
End: 2187330
Strand: Direct
Name: glmS [H]
Synonym: ST2186
Alternate gene names: 15922514
Gene position: 2185552-2187330 (Clockwise)
Preceding gene: 15922513
Following gene: 15922517
Centisome position: 81.1
GC content: 34.51
Gene sequence:
>1779_bases ATGTCTCTTGTGTGCGGAATAATTGGTATAGTATCACTAAGGGAAAGTAAAAAACTTGCTGAAATGACAGTTTCAGCTTT GAAAAGACTTGAATATAGAGGTTATGATAGTGTTGGTGTTGCCTCAATAAGCTCTAATGGTTTAGAAATTAGAAAGGCAA AAGGAAAAGTAGAAGAGGTTGTTCTTCAGAAGAAGATTGAGGAAATGGAAGGATATGTGTTCTTAGGCCATACTAGATGG GCTACTCATGGTCCTCCTACTGATTATAACGCTCATCCTCACACTGACTGTAATGGTAATATAGCTGTAGTACATAATGG GACTATAAAGAATTATAAAGAATTAAGAGAGGAACTTGAGAGTTTAGGTCATAAATTCAAGAGTGAAACTGATACTGAAG TCATCCCCCATTTAATTGAGGAATTTATGAAACGAGGAATGGATCCTTTTCAAGCTTTTAAGTCAGCGATAAAAAGCCTT GAAGGTAGCTATGCAGTCTTGGCTGTTATAAACGGTGAAAGAAGAATATTCTTTGCTAAAAAAGATAATCCATTAATAAT AGGATTAGGTGAAGGGCAAAATTTTATTGCAAGCGATATTCCAGCTTTCTTACCTTATACTAAAAGAATACTAGTTATCA GAGATGACGAGTTAGGTTTTATAACACCAGAAACTGTTTATTTAGAAGATAAAGACGGTAATGTCATCAATATAAAAGAA AGGATAAGAAGTGTAGATTGGGATATAGAAACTGCTAGTAAAGAAGGATATCCTCATTTTATGATTAAGGAAATTCATGA ATCACCAAGGGCAGTAAAAGAGACAATAGACAGCCTAATGAGTGACATAGACTTAGTAGAGAAAGTTATAGAAGAAATAA AAAATGCTGAGAGAGTTATAGTTATAGGAGCTGGAACAAGTTATCATGCTGGTCTTTACTTTTCAATAGAACTTAACAGA CTTGGTATAAACTCTCTACCCGTAATAGCTTCTGAGTACTATAATGTGAGGAGTAAAAAAGGGGACTTAGTTTTTGCGAT AAGTCAAAGCGGTGAAACAATAGATGTACTTCAAGGGATAAGAATGATGCGAAATAGTGGTGCTAAAATTATCTCTCTAA CTAACGTTATAGAAAGTGCTATAGCTAGAGAAAGCGATTATAAAATCTACATGAGGGCAGGACCAGAAATTGGTGTAGCC GCAACAAAAACTTTTACAACACAATTAGCTTCAATTCTCTTCATCCTATCCGTTTTAAAGAAGGAGAATCTAAAGAAAAT GGAAAAAGCTCCAGATATAGTGAGAGATACAATATCACAAGTAGAAGGATTAACAAAGAAAATTGGAGAAGAATTAGCTA AGAAAAGTAATATATACTACTTGGGTAGAGGACTCTCACTACCACTAGCAATGGAAGGTGCATTAAAAATAAAAGAAATA GCTTATGTACATGCCGAAGCATATCCTGCTGGTGAAAGTAAGCATGGGCCAATATCTCTAGTAGAAAAAGGATTCCCAGT AGTTATAATAAATGATGGTGAATTAACAGAACTCTTACAAAATAATTTAATGGAAATGAAGGCTAGAGGGGCTAGAATTT ATGCAGTAAGCGTGAATAAAAAGATGAAAGATGCTGATGTTGAAATAGAGCTTCAGTCCGAGATCCCAGTATTATCTATA GCCCCAGTAATCCAATTAATAGCATATTATGCTGCAGTAACTAAAGGATATGACCCAGATAAACCAAGAAACTTAGCTAA AACAGTTACTGTAGAATAA
Upstream 100 bases:
>100_bases TTTTTAGGAGTTCAAGTAATAAGGAGGACGTGATATGTTTTTGAGGAGTTTGTTGTCAAAGAAATACTTAGGAAAAAGTT AATTTTTATGCAAATATAAT
Downstream 100 bases:
>100_bases CTGAAAATCTCACTATTTACTTACAATATACTTTTTGCTCCTCTGAGATAGCAGTAAGGGGAAATTACTCTTCATTTTTA GAGGGTCTTCTCTGTTAAGT
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MSLVCGIIGIVSLRESKKLAEMTVSALKRLEYRGYDSVGVASISSNGLEIRKAKGKVEEVVLQKKIEEMEGYVFLGHTRW ATHGPPTDYNAHPHTDCNGNIAVVHNGTIKNYKELREELESLGHKFKSETDTEVIPHLIEEFMKRGMDPFQAFKSAIKSL EGSYAVLAVINGERRIFFAKKDNPLIIGLGEGQNFIASDIPAFLPYTKRILVIRDDELGFITPETVYLEDKDGNVINIKE RIRSVDWDIETASKEGYPHFMIKEIHESPRAVKETIDSLMSDIDLVEKVIEEIKNAERVIVIGAGTSYHAGLYFSIELNR LGINSLPVIASEYYNVRSKKGDLVFAISQSGETIDVLQGIRMMRNSGAKIISLTNVIESAIARESDYKIYMRAGPEIGVA ATKTFTTQLASILFILSVLKKENLKKMEKAPDIVRDTISQVEGLTKKIGEELAKKSNIYYLGRGLSLPLAMEGALKIKEI AYVHAEAYPAGESKHGPISLVEKGFPVVIINDGELTELLQNNLMEMKARGARIYAVSVNKKMKDADVEIELQSEIPVLSI APVIQLIAYYAAVTKGYDPDKPRNLAKTVTVE
Sequences:
>Translated_592_residues MSLVCGIIGIVSLRESKKLAEMTVSALKRLEYRGYDSVGVASISSNGLEIRKAKGKVEEVVLQKKIEEMEGYVFLGHTRW ATHGPPTDYNAHPHTDCNGNIAVVHNGTIKNYKELREELESLGHKFKSETDTEVIPHLIEEFMKRGMDPFQAFKSAIKSL EGSYAVLAVINGERRIFFAKKDNPLIIGLGEGQNFIASDIPAFLPYTKRILVIRDDELGFITPETVYLEDKDGNVINIKE RIRSVDWDIETASKEGYPHFMIKEIHESPRAVKETIDSLMSDIDLVEKVIEEIKNAERVIVIGAGTSYHAGLYFSIELNR LGINSLPVIASEYYNVRSKKGDLVFAISQSGETIDVLQGIRMMRNSGAKIISLTNVIESAIARESDYKIYMRAGPEIGVA ATKTFTTQLASILFILSVLKKENLKKMEKAPDIVRDTISQVEGLTKKIGEELAKKSNIYYLGRGLSLPLAMEGALKIKEI AYVHAEAYPAGESKHGPISLVEKGFPVVIINDGELTELLQNNLMEMKARGARIYAVSVNKKMKDADVEIELQSEIPVLSI APVIQLIAYYAAVTKGYDPDKPRNLAKTVTVE >Mature_591_residues SLVCGIIGIVSLRESKKLAEMTVSALKRLEYRGYDSVGVASISSNGLEIRKAKGKVEEVVLQKKIEEMEGYVFLGHTRWA THGPPTDYNAHPHTDCNGNIAVVHNGTIKNYKELREELESLGHKFKSETDTEVIPHLIEEFMKRGMDPFQAFKSAIKSLE GSYAVLAVINGERRIFFAKKDNPLIIGLGEGQNFIASDIPAFLPYTKRILVIRDDELGFITPETVYLEDKDGNVINIKER IRSVDWDIETASKEGYPHFMIKEIHESPRAVKETIDSLMSDIDLVEKVIEEIKNAERVIVIGAGTSYHAGLYFSIELNRL GINSLPVIASEYYNVRSKKGDLVFAISQSGETIDVLQGIRMMRNSGAKIISLTNVIESAIARESDYKIYMRAGPEIGVAA TKTFTTQLASILFILSVLKKENLKKMEKAPDIVRDTISQVEGLTKKIGEELAKKSNIYYLGRGLSLPLAMEGALKIKEIA YVHAEAYPAGESKHGPISLVEKGFPVVIINDGELTELLQNNLMEMKARGARIYAVSVNKKMKDADVEIELQSEIPVLSIA PVIQLIAYYAAVTKGYDPDKPRNLAKTVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI205277386, Length=685, Percent_Identity=32.1167883211679, Blast_Score=319, Evalue=6e-87, Organism=Homo sapiens, GI4826742, Length=687, Percent_Identity=33.0422125181951, Blast_Score=315, Evalue=7e-86, Organism=Escherichia coli, GI1790167, Length=623, Percent_Identity=38.3627608346709, Blast_Score=386, Evalue=1e-108, Organism=Escherichia coli, GI1788651, Length=197, Percent_Identity=26.9035532994924, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082251, Length=332, Percent_Identity=22.289156626506, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17539970, Length=436, Percent_Identity=32.5688073394495, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17532897, Length=434, Percent_Identity=31.3364055299539, Blast_Score=198, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17532899, Length=434, Percent_Identity=31.3364055299539, Blast_Score=198, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17554892, Length=239, Percent_Identity=27.1966527196653, Blast_Score=73, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322745, Length=460, Percent_Identity=30.6521739130435, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6323731, Length=428, Percent_Identity=23.1308411214953, Blast_Score=116, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6323730, Length=206, Percent_Identity=34.9514563106796, Blast_Score=95, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323958, Length=202, Percent_Identity=23.2673267326733, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI21357745, Length=693, Percent_Identity=30.8802308802309, Blast_Score=309, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 65797; Mature: 65666
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVCGIIGIVSLRESKKLAEMTVSALKRLEYRGYDSVGVASISSNGLEIRKAKGKVEEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEHHCCHHHHH VLQKKIEEMEGYVFLGHTRWATHGPPTDYNAHPHTDCNGNIAVVHNGTIKNYKELREELE HHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH SLGHKFKSETDTEVIPHLIEEFMKRGMDPFQAFKSAIKSLEGSYAVLAVINGERRIFFAK HHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEE KDNPLIIGLGEGQNFIASDIPAFLPYTKRILVIRDDELGFITPETVYLEDKDGNVINIKE CCCCEEEEECCCCCHHHHCCCHHCCCCCEEEEEEECCCCEECCCEEEEECCCCCEEEHHH RIRSVDWDIETASKEGYPHFMIKEIHESPRAVKETIDSLMSDIDLVEKVIEEIKNAERVI HHHHCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VIGAGTSYHAGLYFSIELNRLGINSLPVIASEYYNVRSKKGDLVFAISQSGETIDVLQGI EEECCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH RMMRNSGAKIISLTNVIESAIARESDYKIYMRAGPEIGVAATKTFTTQLASILFILSVLK HHHHCCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHH KENLKKMEKAPDIVRDTISQVEGLTKKIGEELAKKSNIYYLGRGLSLPLAMEGALKIKEI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCEEEEHE AYVHAEAYPAGESKHGPISLVEKGFPVVIINDGELTELLQNNLMEMKARGARIYAVSVNK EEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECC KMKDADVEIELQSEIPVLSIAPVIQLIAYYAAVTKGYDPDKPRNLAKTVTVE CCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC >Mature Secondary Structure SLVCGIIGIVSLRESKKLAEMTVSALKRLEYRGYDSVGVASISSNGLEIRKAKGKVEEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEHHCCHHHHH VLQKKIEEMEGYVFLGHTRWATHGPPTDYNAHPHTDCNGNIAVVHNGTIKNYKELREELE HHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH SLGHKFKSETDTEVIPHLIEEFMKRGMDPFQAFKSAIKSLEGSYAVLAVINGERRIFFAK HHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEE KDNPLIIGLGEGQNFIASDIPAFLPYTKRILVIRDDELGFITPETVYLEDKDGNVINIKE CCCCEEEEECCCCCHHHHCCCHHCCCCCEEEEEEECCCCEECCCEEEEECCCCCEEEHHH RIRSVDWDIETASKEGYPHFMIKEIHESPRAVKETIDSLMSDIDLVEKVIEEIKNAERVI HHHHCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE VIGAGTSYHAGLYFSIELNRLGINSLPVIASEYYNVRSKKGDLVFAISQSGETIDVLQGI EEECCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH RMMRNSGAKIISLTNVIESAIARESDYKIYMRAGPEIGVAATKTFTTQLASILFILSVLK HHHHCCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHH KENLKKMEKAPDIVRDTISQVEGLTKKIGEELAKKSNIYYLGRGLSLPLAMEGALKIKEI HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCEEEEHE AYVHAEAYPAGESKHGPISLVEKGFPVVIINDGELTELLQNNLMEMKARGARIYAVSVNK EEEEEECCCCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECC KMKDADVEIELQSEIPVLSIAPVIQLIAYYAAVTKGYDPDKPRNLAKTVTVE CCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA