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The map label for this gene is ocd2 [H]

Identifier: 15922506

GI number: 15922506

Start: 2178384

End: 2179430

Strand: Direct

Name: ocd2 [H]

Synonym: ST2179

Alternate gene names: 15922506

Gene position: 2178384-2179430 (Clockwise)

Preceding gene: 15922503

Following gene: 15922510

Centisome position: 80.84

GC content: 32.86

Gene sequence:

>1047_bases
ATGACTGTTTATCCTCTCTTCTACTATATAAGTTTTCATGCATTATTGTTCTTTCAACTCCTATATTATTTTATTTTACA
AAAAGGTAATGGCAAAATCTTTAACAGAGTTAATTCATATTTTAATACAATGATTATTTTAACAGGGAAGGATTTAGAAG
AGGTATTAAAGCCAGAGATAGCTGTAAATGCTGTAAGAGAAGCTTTTTCCCTTTTCTCCTCTGGAAAAGTTATTCAGCCT
CAAAGACAAGTGATAACGATAAAAGGTAATTGGTGGGGAATAATGCCTTCTTTTACAGATTTTTCATTCTCTACAAAGAT
TGTGAACGTTATACCTAAAAACAAGGAAAAGGGTTTACCCTCAGTACAAGGAGTTGTTATACTGATGTCTCCAGATACCG
GAGAAACATTGGCTATTTTAGAAGGATCAATTTTAACAGCAATAAGAACTGCTTCTGCAAGTGTTTTATCAACAGAATTA
GCGTTAAGGTCAAGACATATAGATACTCTTGGAATTATTGGAGCTGGAATGGAGGCTAAATATCATTTAAAAATCACTCT
CAAATTCTTTTCAGTTTCTAGGGTTTTAATCTCTGCAAGAAAAAGCCATTATGAGTTAGCAAAAGAATACGGTGGAGAAG
CTGTAGAGTTAGAGAAACTTTTGAAGGAATCACAAGTAATTTATGCCACAACTTCTTCGGACAAGCCGGTAGTTTTAGGT
AAACTCTTGTCTAACGATTTTCATGTTTCTAGTATAGGTGCTCATACCCCAACTGCTAGAGAAATTGATGATGATACCAT
AATGAAATCAAAAACGTATTTTGTAGATTCGTTAGAAGCTGTATCCAATGAAACTGGAGATTTTATTGAGCCTAAGAGAA
AAGGAATAATGCCTCAAGTTTATGAAATAGGAGAAATTATAAACAAAAATATAAAAATTCAAAGACCCTCAATCTTTAAG
ACCGTAGGTATTGCAGCTCAAGATAATATAACCGCATATATAGCATATGAGGAAGCATTAAAGAGAGGTATAGGAATAAA
AATCTAA

Upstream 100 bases:

>100_bases
TAAAGCGTAATGTTACCTCATTTTTCCCTCTTTCAACCTGGTAAGGGATATAGGAAAGTATAAATTCTGAATTTTTAGTT
ATTGATTCGATAAAATTAAG

Downstream 100 bases:

>100_bases
TCCTTTCCCCTCCAGATAACGTTAGGATTATTCGTTCTTTTATTTACAACTAAAGCTAAGACAAAAAGTAAAGACGATAA
CCTATTTAAGTATTTTGCAT

Product: mu-crystallin

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTVYPLFYYISFHALLFFQLLYYFILQKGNGKIFNRVNSYFNTMIILTGKDLEEVLKPEIAVNAVREAFSLFSSGKVIQP
QRQVITIKGNWWGIMPSFTDFSFSTKIVNVIPKNKEKGLPSVQGVVILMSPDTGETLAILEGSILTAIRTASASVLSTEL
ALRSRHIDTLGIIGAGMEAKYHLKITLKFFSVSRVLISARKSHYELAKEYGGEAVELEKLLKESQVIYATTSSDKPVVLG
KLLSNDFHVSSIGAHTPTAREIDDDTIMKSKTYFVDSLEAVSNETGDFIEPKRKGIMPQVYEIGEIINKNIKIQRPSIFK
TVGIAAQDNITAYIAYEEALKRGIGIKI

Sequences:

>Translated_348_residues
MTVYPLFYYISFHALLFFQLLYYFILQKGNGKIFNRVNSYFNTMIILTGKDLEEVLKPEIAVNAVREAFSLFSSGKVIQP
QRQVITIKGNWWGIMPSFTDFSFSTKIVNVIPKNKEKGLPSVQGVVILMSPDTGETLAILEGSILTAIRTASASVLSTEL
ALRSRHIDTLGIIGAGMEAKYHLKITLKFFSVSRVLISARKSHYELAKEYGGEAVELEKLLKESQVIYATTSSDKPVVLG
KLLSNDFHVSSIGAHTPTAREIDDDTIMKSKTYFVDSLEAVSNETGDFIEPKRKGIMPQVYEIGEIINKNIKIQRPSIFK
TVGIAAQDNITAYIAYEEALKRGIGIKI
>Mature_347_residues
TVYPLFYYISFHALLFFQLLYYFILQKGNGKIFNRVNSYFNTMIILTGKDLEEVLKPEIAVNAVREAFSLFSSGKVIQPQ
RQVITIKGNWWGIMPSFTDFSFSTKIVNVIPKNKEKGLPSVQGVVILMSPDTGETLAILEGSILTAIRTASASVLSTELA
LRSRHIDTLGIIGAGMEAKYHLKITLKFFSVSRVLISARKSHYELAKEYGGEAVELEKLLKESQVIYATTSSDKPVVLGK
LLSNDFHVSSIGAHTPTAREIDDDTIMKSKTYFVDSLEAVSNETGDFIEPKRKGIMPQVYEIGEIINKNIKIQRPSIFKT
VGIAAQDNITAYIAYEEALKRGIGIKI

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=310, Percent_Identity=29.0322580645161, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI62241008, Length=275, Percent_Identity=29.0909090909091, Blast_Score=117, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 38807; Mature: 38675

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYPLFYYISFHALLFFQLLYYFILQKGNGKIFNRVNSYFNTMIILTGKDLEEVLKPEI
CEEEHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCEEEEEECCCHHHHHCCHH
AVNAVREAFSLFSSGKVIQPQRQVITIKGNWWGIMPSFTDFSFSTKIVNVIPKNKEKGLP
HHHHHHHHHHHHCCCCEECCCCEEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCCCCC
SVQGVVILMSPDTGETLAILEGSILTAIRTASASVLSTELALRSRHIDTLGIIGAGMEAK
CCCCEEEEECCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCEE
YHLKITLKFFSVSRVLISARKSHYELAKEYGGEAVELEKLLKESQVIYATTSSDKPVVLG
EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCEEEH
KLLSNDFHVSSIGAHTPTAREIDDDTIMKSKTYFVDSLEAVSNETGDFIEPKRKGIMPQV
HHHCCCCEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHH
YEIGEIINKNIKIQRPSIFKTVGIAAQDNITAYIAYEEALKRGIGIKI
HHHHHHHCCCEEEECCCHHHHCCEEECCCEEEEEEEHHHHHCCCCCCC
>Mature Secondary Structure 
TVYPLFYYISFHALLFFQLLYYFILQKGNGKIFNRVNSYFNTMIILTGKDLEEVLKPEI
EEEHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCEEEEEECCCHHHHHCCHH
AVNAVREAFSLFSSGKVIQPQRQVITIKGNWWGIMPSFTDFSFSTKIVNVIPKNKEKGLP
HHHHHHHHHHHHCCCCEECCCCEEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCCCCC
SVQGVVILMSPDTGETLAILEGSILTAIRTASASVLSTELALRSRHIDTLGIIGAGMEAK
CCCCEEEEECCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCEE
YHLKITLKFFSVSRVLISARKSHYELAKEYGGEAVELEKLLKESQVIYATTSSDKPVVLG
EEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCEEEH
KLLSNDFHVSSIGAHTPTAREIDDDTIMKSKTYFVDSLEAVSNETGDFIEPKRKGIMPQV
HHHCCCCEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHCCCCHHH
YEIGEIINKNIKIQRPSIFKTVGIAAQDNITAYIAYEEALKRGIGIKI
HHHHHHHCCCEEEECCCHHHHCCEEECCCEEEEEEEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]