Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is yjgR [C]

Identifier: 15922432

GI number: 15922432

Start: 2113725

End: 2115212

Strand: Direct

Name: yjgR [C]

Synonym: ST2106

Alternate gene names: 15922432

Gene position: 2113725-2115212 (Clockwise)

Preceding gene: 15922431

Following gene: 15922433

Centisome position: 78.44

GC content: 32.73

Gene sequence:

>1488_bases
ATGATAATTGGTTATGTAGTTGGTTCAGCAACTACTCAAGAAGCAAACGTGTTATTAGAGAAAAAAGTAAGATCTGGTTA
CTACGTTACCTTAGAATATGATGATGAAAAAGTATTAGGCTTAGTTACGTTAATTACTACTGGAAGTCCTTTAGTTGATG
ATAGTCTCAACGATATTGAACTTGTACAACGAATAAAACAAATGGGAAATAAAATTCCTATTTACATGAAAGCTAAAGTT
AAGCTACTTTGTAAATTGGACGGAAAACTCTCTCAACCTGACTTACCTCCAGTAGCCGGAACACCTGTGAGGTTAGCAAC
TAACGAAGAACTAAGTACAATATTTTCTGAGGGAACTATAAGAATCGGTAAATTAATTGGAAGCGATGTTGAGGTTAGAA
TCAGAGTAAACGCATTAACCAGACACTTAGCTATTCTAGCTGCAACAGGATCTGGAAAATCTAATACAGTGGCCGTTCTT
TCCTCTAGGTTATCTGAGGTATTTGGATCAGTGCTAATTTTTGATTATCACGGAGAATATTATGAGAGTGAGATTAAGAA
TCTAAATAATATAGAACCAAAAATAAATCCTCTAAATTTGACTCCAGATGAATTTGCGACTTTATTAGAAATTAGAGAAA
ATGCTACAATTCAATATAGGATATTAAGGAGAGCGTTCAAAAGTTTTCTTGAAGAAACTAAAGAAAAATTAAAAAATGGT
AATGTAAACTATAATGAGCTTAATAATAATTTTAGGAATTTGATACTTAAAAAGGTTGATGAAGTAAGTAAGAACGAGAA
AAGAAAAGATAGTAAAGATGAGGTTATCAATAAAATAGAAGACTTTCTAGATAGATACTCTGAGATTATTGACTTCACTG
CTGGTGATGTTGTAGATAAAATAAAAATAGGTAAAGTAAATGTGATAAACTTAAGTTCTCTAGATGAAGATGCAATTGAC
GCAATAGTTTCTCACTATTTAAGAAAAATATTAACTTCAAGAAAAGAAAACAAAATGAAGAGAAAAATTGGTTTAAAATT
TCCAGTACTAGTAGTTATTGAAGAGGCCCATGTGTTACTATCTAAAGATAGTAACACCCTAACAAAACATTGGGCTGGAA
GAATCGCTAGAGAAGGAAGAAAATTCGGTGTAGGACTAATAATCGTTAGCCAAAGACCTAAGGGAATTGACGAGAATATT
TTAAGTCAAATGACTAATAAGATAATCCTTAAGATGGTTGAGCCTTCTGATAAGAAATATGTGCTTGAAACTAGTGACAA
TCTTAGTGAAGATATAGTCGAAGGCCTTTCAGCTTTAGACACAGGAGAAGCCGTGATAGTTGGTAATATAGTGAGAATGC
CAGCTATAGTAAAAATTGATAAGTTTGAGGGAAAACTAGCTGGAAGCGATCCAAACCTAATAGAAGAATGGAAGAAAGCT
AAAGAAGAAATTGAGGAGCATGCAGATGTATTGAATTGGGGTGAGTAA

Upstream 100 bases:

>100_bases
AACAGCAAGAAAAGTTGCTGGTGCACTTTAAAGCTATTTTTTGGTATTACCTTTTTCCTTATCGAAATTATTTAAGCTCT
TCTATTTAATCTATTTTTAT

Downstream 100 bases:

>100_bases
GACGCAAATTTTACATATTTCTGATACGCATTTAGGTAAGAGACAGTATAATCTTGATTTTAGGGAACAGGATGTATATG
ATACTTTTTCACAACTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MIIGYVVGSATTQEANVLLEKKVRSGYYVTLEYDDEKVLGLVTLITTGSPLVDDSLNDIELVQRIKQMGNKIPIYMKAKV
KLLCKLDGKLSQPDLPPVAGTPVRLATNEELSTIFSEGTIRIGKLIGSDVEVRIRVNALTRHLAILAATGSGKSNTVAVL
SSRLSEVFGSVLIFDYHGEYYESEIKNLNNIEPKINPLNLTPDEFATLLEIRENATIQYRILRRAFKSFLEETKEKLKNG
NVNYNELNNNFRNLILKKVDEVSKNEKRKDSKDEVINKIEDFLDRYSEIIDFTAGDVVDKIKIGKVNVINLSSLDEDAID
AIVSHYLRKILTSRKENKMKRKIGLKFPVLVVIEEAHVLLSKDSNTLTKHWAGRIAREGRKFGVGLIIVSQRPKGIDENI
LSQMTNKIILKMVEPSDKKYVLETSDNLSEDIVEGLSALDTGEAVIVGNIVRMPAIVKIDKFEGKLAGSDPNLIEEWKKA
KEEIEEHADVLNWGE

Sequences:

>Translated_495_residues
MIIGYVVGSATTQEANVLLEKKVRSGYYVTLEYDDEKVLGLVTLITTGSPLVDDSLNDIELVQRIKQMGNKIPIYMKAKV
KLLCKLDGKLSQPDLPPVAGTPVRLATNEELSTIFSEGTIRIGKLIGSDVEVRIRVNALTRHLAILAATGSGKSNTVAVL
SSRLSEVFGSVLIFDYHGEYYESEIKNLNNIEPKINPLNLTPDEFATLLEIRENATIQYRILRRAFKSFLEETKEKLKNG
NVNYNELNNNFRNLILKKVDEVSKNEKRKDSKDEVINKIEDFLDRYSEIIDFTAGDVVDKIKIGKVNVINLSSLDEDAID
AIVSHYLRKILTSRKENKMKRKIGLKFPVLVVIEEAHVLLSKDSNTLTKHWAGRIAREGRKFGVGLIIVSQRPKGIDENI
LSQMTNKIILKMVEPSDKKYVLETSDNLSEDIVEGLSALDTGEAVIVGNIVRMPAIVKIDKFEGKLAGSDPNLIEEWKKA
KEEIEEHADVLNWGE
>Mature_495_residues
MIIGYVVGSATTQEANVLLEKKVRSGYYVTLEYDDEKVLGLVTLITTGSPLVDDSLNDIELVQRIKQMGNKIPIYMKAKV
KLLCKLDGKLSQPDLPPVAGTPVRLATNEELSTIFSEGTIRIGKLIGSDVEVRIRVNALTRHLAILAATGSGKSNTVAVL
SSRLSEVFGSVLIFDYHGEYYESEIKNLNNIEPKINPLNLTPDEFATLLEIRENATIQYRILRRAFKSFLEETKEKLKNG
NVNYNELNNNFRNLILKKVDEVSKNEKRKDSKDEVINKIEDFLDRYSEIIDFTAGDVVDKIKIGKVNVINLSSLDEDAID
AIVSHYLRKILTSRKENKMKRKIGLKFPVLVVIEEAHVLLSKDSNTLTKHWAGRIAREGRKFGVGLIIVSQRPKGIDENI
LSQMTNKIILKMVEPSDKKYVLETSDNLSEDIVEGLSALDTGEAVIVGNIVRMPAIVKIDKFEGKLAGSDPNLIEEWKKA
KEEIEEHADVLNWGE

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJECL08 and MJ1429 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571
- InterPro:   IPR002789
- InterPro:   IPR018538 [H]

Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]

EC number: NA

Molecular weight: Translated: 55519; Mature: 55519

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGYVVGSATTQEANVLLEKKVRSGYYVTLEYDDEKVLGLVTLITTGSPLVDDSLNDIE
CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHEEEEEEEECCCCCCCCCCCHHH
LVQRIKQMGNKIPIYMKAKVKLLCKLDGKLSQPDLPPVAGTPVRLATNEELSTIFSEGTI
HHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCE
RIGKLIGSDVEVRIRVNALTRHLAILAATGSGKSNTVAVLSSRLSEVFGSVLIFDYHGEY
EEEHHCCCCEEEEEEHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCHH
YESEIKNLNNIEPKINPLNLTPDEFATLLEIRENATIQYRILRRAFKSFLEETKEKLKNG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCC
NVNYNELNNNFRNLILKKVDEVSKNEKRKDSKDEVINKIEDFLDRYSEIIDFTAGDVVDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IKIGKVNVINLSSLDEDAIDAIVSHYLRKILTSRKENKMKRKIGLKFPVLVVIEEAHVLL
EEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEE
SKDSNTLTKHWAGRIAREGRKFGVGLIIVSQRPKGIDENILSQMTNKIILKMVEPSDKKY
ECCCCHHHHHHHHHHHHCCCEECEEEEEEECCCCCCCHHHHHHHHHHHEEEEECCCCCEE
VLETSDNLSEDIVEGLSALDTGEAVIVGNIVRMPAIVKIDKFEGKLAGSDPNLIEEWKKA
EEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCEEEEEECCCCEECCCCCHHHHHHHHH
KEEIEEHADVLNWGE
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MIIGYVVGSATTQEANVLLEKKVRSGYYVTLEYDDEKVLGLVTLITTGSPLVDDSLNDIE
CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHEEEEEEEECCCCCCCCCCCHHH
LVQRIKQMGNKIPIYMKAKVKLLCKLDGKLSQPDLPPVAGTPVRLATNEELSTIFSEGTI
HHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCE
RIGKLIGSDVEVRIRVNALTRHLAILAATGSGKSNTVAVLSSRLSEVFGSVLIFDYHGEY
EEEHHCCCCEEEEEEHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCHH
YESEIKNLNNIEPKINPLNLTPDEFATLLEIRENATIQYRILRRAFKSFLEETKEKLKNG
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCC
NVNYNELNNNFRNLILKKVDEVSKNEKRKDSKDEVINKIEDFLDRYSEIIDFTAGDVVDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IKIGKVNVINLSSLDEDAIDAIVSHYLRKILTSRKENKMKRKIGLKFPVLVVIEEAHVLL
EEECEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEE
SKDSNTLTKHWAGRIAREGRKFGVGLIIVSQRPKGIDENILSQMTNKIILKMVEPSDKKY
ECCCCHHHHHHHHHHHHCCCEECEEEEEEECCCCCCCHHHHHHHHHHHEEEEECCCCCEE
VLETSDNLSEDIVEGLSALDTGEAVIVGNIVRMPAIVKIDKFEGKLAGSDPNLIEEWKKA
EEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCEEEEEECCCCEECCCCCHHHHHHHHH
KEEIEEHADVLNWGE
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]