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The map label for this gene is nodC [H]

Identifier: 15922341

GI number: 15922341

Start: 2038392

End: 2039639

Strand: Reverse

Name: nodC [H]

Synonym: ST2021

Alternate gene names: 15922341

Gene position: 2039639-2038392 (Counterclockwise)

Preceding gene: 15922342

Following gene: 15922339

Centisome position: 75.69

GC content: 30.93

Gene sequence:

>1248_bases
GTGGTGATTATGTTTCACTTATTTCACGGAGTCTCATATTTCATTTATTCTCTTTCATTCACAATTATAACTATTCTTTA
TTTCTTTTTGAATTCATTTTTTGCAGTAATAAGTAATAATAGAAAAACTCAACACTCAAGTTTTTATAATCTCTCTGATC
TTACAGTTGTGATACCAGTTTATAAGGAGGAAATAGATATTTTTGAAAAAGTGATAAGGACTTTATATGACACAAGGTTA
GAATTTATTGTTGTAGGGGATAGTGTTCTAGAACCATACAAATCAATTACGGAAAGATATGGTGGTAAATTTATTTATAT
GCGTGAACATAAGGGGAAAAGATACGCGTTAGCCGAGGGAGTTAAGTATGTAAGATCTCCTCTAGTGATGTTTCTAGATA
GTGATACGATTATTTATAAAGACTCTATACTAAAGATGTTAAGTGTTTTTGATGAGTCAGTAGGTGGAGTAGGGCCAAAT
ATTAGAATTATGTATGACGAGAAAAATAAATATGCATATTATTATGGTGAATTCTTTGAGAGAATAAGTGAGATAGTAAA
CAGGGCGGTAAACTATTTTGGAAGTGCTATAATATTAAGTGGACAATGTGTAATATATAGGACCGAACTCGTAAAACCAT
ATATATTATCTAAAGAGTTTTTAGAGCCGAAAATGTTTGGAAGACCAATTAAAATTTCCGATGATAGAGATTTAACCGAT
TTTGTTATAAAAAAAGGGTATAGGGCTGTAAAAGTCTTTGATGCAGTGGCATATACAAAACCCCCTAGAGACATAAAAAT
GTTTACGAAACAAGTAACTAGATGGACAAGAGCAAATTATCTTAATTTTATAAGGGAGATAGCTGACGGTAGTATAAGTA
AAAGGGGTTCATTATACGTTTTTAATATGATATACACCAATCTGTTACCATTATTTACGCTCTTGTTCCTTTATATGAGT
TTCACTAGAATTCTTAAGATCTATTCCTCAATTAATGTAATTAATACTAAGCTCTTATTACTATTGTATCTGCCAACCCG
TTACCATTCCGACTTCTTTATCTTTTATTTATTCTTGCATTACGGAGGATTTATAGCTATAATACCCTTTGTAATGACCA
TGATTTATTTAATTCCAGAAGATAAATTGAAAACTCTAATATACGGTTCTATCGCACTAGCAGTGCAATATATTGCTTCC
CTATATGCTATGATAACTTTCTGGTGGCAAGATTGGTTAACTAGATAA

Upstream 100 bases:

>100_bases
CAACTTTGGGATACGAAAAGTTAACTAACCCCTTTTTGAACGGAGAATTCGAATGGTGAATTAGGAAAAATCGTTATATA
TTTCGATATCGAGCATTATA

Downstream 100 bases:

>100_bases
CTCCTTTCTCTTTCTAAAAAAGGCCATTTCAAGCTTAACCGCATGAGGGCACAATTTTTCCCCACATTCACAAGAAGAAT
CAATTAGTCTAAATCCCTTT

Product: hyaluronan synthase

Products: NA

Alternate protein names: Nodulation protein C [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MVIMFHLFHGVSYFIYSLSFTIITILYFFLNSFFAVISNNRKTQHSSFYNLSDLTVVIPVYKEEIDIFEKVIRTLYDTRL
EFIVVGDSVLEPYKSITERYGGKFIYMREHKGKRYALAEGVKYVRSPLVMFLDSDTIIYKDSILKMLSVFDESVGGVGPN
IRIMYDEKNKYAYYYGEFFERISEIVNRAVNYFGSAIILSGQCVIYRTELVKPYILSKEFLEPKMFGRPIKISDDRDLTD
FVIKKGYRAVKVFDAVAYTKPPRDIKMFTKQVTRWTRANYLNFIREIADGSISKRGSLYVFNMIYTNLLPLFTLLFLYMS
FTRILKIYSSINVINTKLLLLLYLPTRYHSDFFIFYLFLHYGGFIAIIPFVMTMIYLIPEDKLKTLIYGSIALAVQYIAS
LYAMITFWWQDWLTR

Sequences:

>Translated_415_residues
MVIMFHLFHGVSYFIYSLSFTIITILYFFLNSFFAVISNNRKTQHSSFYNLSDLTVVIPVYKEEIDIFEKVIRTLYDTRL
EFIVVGDSVLEPYKSITERYGGKFIYMREHKGKRYALAEGVKYVRSPLVMFLDSDTIIYKDSILKMLSVFDESVGGVGPN
IRIMYDEKNKYAYYYGEFFERISEIVNRAVNYFGSAIILSGQCVIYRTELVKPYILSKEFLEPKMFGRPIKISDDRDLTD
FVIKKGYRAVKVFDAVAYTKPPRDIKMFTKQVTRWTRANYLNFIREIADGSISKRGSLYVFNMIYTNLLPLFTLLFLYMS
FTRILKIYSSINVINTKLLLLLYLPTRYHSDFFIFYLFLHYGGFIAIIPFVMTMIYLIPEDKLKTLIYGSIALAVQYIAS
LYAMITFWWQDWLTR
>Mature_415_residues
MVIMFHLFHGVSYFIYSLSFTIITILYFFLNSFFAVISNNRKTQHSSFYNLSDLTVVIPVYKEEIDIFEKVIRTLYDTRL
EFIVVGDSVLEPYKSITERYGGKFIYMREHKGKRYALAEGVKYVRSPLVMFLDSDTIIYKDSILKMLSVFDESVGGVGPN
IRIMYDEKNKYAYYYGEFFERISEIVNRAVNYFGSAIILSGQCVIYRTELVKPYILSKEFLEPKMFGRPIKISDDRDLTD
FVIKKGYRAVKVFDAVAYTKPPRDIKMFTKQVTRWTRANYLNFIREIADGSISKRGSLYVFNMIYTNLLPLFTLLFLYMS
FTRILKIYSSINVINTKLLLLLYLPTRYHSDFFIFYLFLHYGGFIAIIPFVMTMIYLIPEDKLKTLIYGSIALAVQYIAS
LYAMITFWWQDWLTR

Specific function: Involved in the synthesis of Nod factor, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation [H]

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodC/HAS family [H]

Homologues:

Organism=Homo sapiens, GI20302153, Length=277, Percent_Identity=25.9927797833935, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4885391, Length=192, Percent_Identity=27.6041666666667, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 48923; Mature: 48923

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIMFHLFHGVSYFIYSLSFTIITILYFFLNSFFAVISNNRKTQHSSFYNLSDLTVVIPV
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEH
YKEEIDIFEKVIRTLYDTRLEFIVVGDSVLEPYKSITERYGGKFIYMREHKGKRYALAEG
HHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHH
VKYVRSPLVMFLDSDTIIYKDSILKMLSVFDESVGGVGPNIRIMYDEKNKYAYYYGEFFE
HHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHH
RISEIVNRAVNYFGSAIILSGQCVIYRTELVKPYILSKEFLEPKMFGRPIKISDDRDLTD
HHHHHHHHHHHHCCCEEEEECCEEEEEHHHCCHHHHHHHHCCHHHCCCCEEECCCCCHHH
FVIKKGYRAVKVFDAVAYTKPPRDIKMFTKQVTRWTRANYLNFIREIADGSISKRGSLYV
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
FNMIYTNLLPLFTLLFLYMSFTRILKIYSSINVINTKLLLLLYLPTRYHSDFFIFYLFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH
YGGFIAIIPFVMTMIYLIPEDKLKTLIYGSIALAVQYIASLYAMITFWWQDWLTR
HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVIMFHLFHGVSYFIYSLSFTIITILYFFLNSFFAVISNNRKTQHSSFYNLSDLTVVIPV
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEH
YKEEIDIFEKVIRTLYDTRLEFIVVGDSVLEPYKSITERYGGKFIYMREHKGKRYALAEG
HHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHH
VKYVRSPLVMFLDSDTIIYKDSILKMLSVFDESVGGVGPNIRIMYDEKNKYAYYYGEFFE
HHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHH
RISEIVNRAVNYFGSAIILSGQCVIYRTELVKPYILSKEFLEPKMFGRPIKISDDRDLTD
HHHHHHHHHHHHCCCEEEEECCEEEEEHHHCCHHHHHHHHCCHHHCCCCEEECCCCCHHH
FVIKKGYRAVKVFDAVAYTKPPRDIKMFTKQVTRWTRANYLNFIREIADGSISKRGSLYV
HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
FNMIYTNLLPLFTLLFLYMSFTRILKIYSSINVINTKLLLLLYLPTRYHSDFFIFYLFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH
YGGFIAIIPFVMTMIYLIPEDKLKTLIYGSIALAVQYIASLYAMITFWWQDWLTR
HCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2615763; 8146173 [H]